Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC066616.2-201ENST00000559334 1481 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 RNU6-452P-201ENST00000384406 107 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 HLFP1-201ENST00000402375 499 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AL590704.1-201ENST00000402856 794 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 CBX1P4-201ENST00000439415 457 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC010618.1-201ENST00000469924 477 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 HPRT1P1-201ENST00000509498 657 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC087369.1-201ENST00000520775 996 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC090877.1-201ENST00000561418 344 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 AC090506.2-201ENST00000624521 419 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 ATE1-AS1-202ENST00000636460 506 ntBASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC50Q8IVM0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC016397.1-201ENST00000412463 242 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC105402.1-201ENST00000413336 545 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC009965.2-201ENST00000425328 970 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC073069.1-201ENST00000428657 441 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 MTND4LP7-201ENST00000431728 294 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL513343.1-201ENST00000451818 792 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC006511.1-201ENST00000470614 315 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC026979.1-201ENST00000492525 396 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 FTH1P9-201ENST00000513251 355 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL139174.1-201ENST00000531489 886 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL049870.4-201ENST00000555741 486 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 CYP2C60P-201ENST00000566088 139 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 MIR4425-201ENST00000580572 84 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AL365503.1-201ENST00000605247 905 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 AC005962.2-201ENST00000611427 652 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 OR52H1-202ENST00000641796 1061 ntBASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC50Q8IVM0 RLIMP1-201ENST00000339626 1680 ntBASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 PWAR6-201ENST00000552334 4618 ntBASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 HSPE1P8-201ENST00000406997 288 ntBASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 LINC01881-201ENST00000416103 412 ntBASIC4.03□□□□□ -1.76
CCDC50Q8IVM0 Z97055.1-201ENST00000419730 712 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms