Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RNU1-32P-201ENST00000363937 159 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RNA5SP189-201ENST00000364920 115 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RNU6-317P-201ENST00000384031 107 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MIR591-201ENST00000385290 95 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AL161909.1-201ENST00000397390 712 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 GSTA12P-201ENST00000402398 508 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RN7SKP285-201ENST00000410137 318 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RPL26P37-201ENST00000411983 438 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC016769.2-201ENST00000414815 475 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RPL21P109-201ENST00000422213 475 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 OR5BE1P-201ENST00000425977 939 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 BTF3P10-201ENST00000433415 495 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 TXNP1-201ENST00000441872 371 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RPS17P13-201ENST00000448974 407 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC092754.2-201ENST00000463506 460 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 ZNF542P-204ENST00000482727 1305 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RN7SL604P-201ENST00000492589 296 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RAB9BP1-201ENST00000519581 626 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MIR4284-201ENST00000578924 81 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC005261.4-201ENST00000600047 1385 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC005183.1-201ENST00000603687 1979 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 HMGB1P51-201ENST00000605166 638 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 AC018754.1-201ENST00000607486 925 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MIR3653-201ENST00000625572 110 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 MIR7641-1-201ENST00000627518 61 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 OR5BE1P-202ENST00000641168 1176 ntBASIC3.06□□□□□ -1.92
FAM78BQ5VT40 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.06□□□□□ -1.92
FAM78BQ5VT40 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 ZNF826P-207ENST00000622273 1910 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AP000567.1-201ENST00000406413 156 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 HSPE1P12-201ENST00000412576 301 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 RPL18P10-201ENST00000425606 538 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 OR5AW1P-201ENST00000426334 1006 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 MTCYBP12-201ENST00000440559 1134 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 RANP8-201ENST00000444720 713 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 RPS29P31-201ENST00000446147 164 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 HMGB3P8-201ENST00000449709 577 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 RN7SL860P-201ENST00000473738 223 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC105137.1-201ENST00000484355 562 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 TRBV12-2-201ENST00000489763 344 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC091167.1-201ENST00000492017 396 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC026784.1-201ENST00000507986 352 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 SUMO2P20-201ENST00000520803 283 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC090877.1-201ENST00000561418 344 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 CYP2C60P-201ENST00000566088 139 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AL133247.2-201ENST00000603236 482 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC138473.1-201ENST00000605717 526 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 MIR7973-1-201ENST00000614683 76 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC011472.4-201ENST00000615848 491 ntBASIC3.05□□□□□ -1.92
FAM78BQ5VT40 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
FAM78BQ5VT40 AC010435.1-201ENST00000623353 1177 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms