Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AC010374.2-201ENST00000512933 535 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AC006946.3-201ENST00000609791 756 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AC073073.2-201ENST00000609827 2578 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AC018529.3-201ENST00000624212 2254 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 RSL24D1P4-201ENST00000400938 484 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AL691447.1-201ENST00000419456 387 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 RPS20P1-201ENST00000434853 354 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 RPL5P12-201ENST00000477071 851 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 PSMA2P1-201ENST00000526365 646 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RIF1Q5UIP0 AC006504.1-201ENST00000562493 3666 ntBASIC3.34□□□□□ -1.87
RIF1Q5UIP0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 FAM133CP-201ENST00000332869 704 ntBASIC3.34□□□□□ -1.87
RIF1Q5UIP0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.34□□□□□ -1.87
RIF1Q5UIP0 HMGB3P13-201ENST00000511263 607 ntBASIC3.34□□□□□ -1.87
RIF1Q5UIP0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RIF1Q5UIP0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 SKP1P3-201ENST00000429280 487 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC010655.1-201ENST00000449336 292 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC006480.1-201ENST00000449887 378 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 SLC25A36P1-201ENST00000590111 465 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC005086.4-201ENST00000623065 213 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 AC092376.2-201ENST00000622621 4116 ntBASIC3.34□□□□□ -1.88
RIF1Q5UIP0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.34□□□□□ -1.88
RIF1Q5UIP0 Z95327.2-201ENST00000414579 1873 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC067945.1-201ENST00000342609 618 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC126389.1-201ENST00000477436 290 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 DEFB122-202ENST00000569013 197 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC095038.2-201ENST00000621464 1070 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 RPL21P112-201ENST00000434403 463 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC112492.1-201ENST00000449607 712 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 HMGB1P5-202ENST00000451497 985 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC012603.1-201ENST00000606424 528 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 BNIP3P41-202ENST00000616656 861 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AL591424.2-201ENST00000617023 128 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 RNA5SP439-201ENST00000617595 124 ntBASIC3.33□□□□□ -1.88
RIF1Q5UIP0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.33□□□□□ -1.88
RIF1Q5UIP0 AC083837.1-201ENST00000565297 2994 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 HSPD1P11-201ENST00000508643 1702 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL139174.1-201ENST00000531489 886 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL732618.1-201ENST00000623251 301 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC126323.6-202ENST00000568092 3511 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms