Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AC022884.3-201ENST00000579571 248 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AP001180.3-201ENST00000582221 145 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AC005242.1-201ENST00000585658 438 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AC011477.5-201ENST00000586571 259 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AC004775.1-201ENST00000607389 753 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 MIR8059-201ENST00000620427 81 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 C2orf27A-204ENST00000623058 969 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AC011944.2-201ENST00000624440 683 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RFX4Q33E94 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.59□□□□□ -1.84
RFX4Q33E94 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 UBE2V1P15-201ENST00000407776 448 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 SNORA57.3-201ENST00000411095 141 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 RNU4-74P-201ENST00000411280 161 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 ARL2BPP3-201ENST00000421226 480 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 HIGD1AP12-201ENST00000427832 281 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 EIF2S2P2-201ENST00000447161 982 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AC004801.2-202ENST00000463559 283 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 CABYRP1-201ENST00000465493 1045 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 UQCRHP4-201ENST00000471686 272 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 RN7SL860P-201ENST00000473738 223 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 RPL7P47-201ENST00000497299 556 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 RPS27AP13-201ENST00000498403 237 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC008489.1-201ENST00000524271 483 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 MIR4425-201ENST00000580572 84 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 IPO5P1-202ENST00000600039 287 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AL137849.1-201ENST00000604767 169 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AP004607.9-201ENST00000618202 316 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AC139769.3-201ENST00000618383 175 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.58□□□□□ -1.84
RFX4Q33E94 AC010608.2-201ENST00000624830 470 ntBASIC3.58□□□□□ -1.84
RFX4Q33E94 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
RFX4Q33E94 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFX4Q33E94 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX4Q33E94 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX4Q33E94 RNA5SP443-201ENST00000363083 132 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 RNU11-4P-201ENST00000391149 133 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC108032.1-201ENST00000416706 207 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.57□□□□□ -1.84
RFX4Q33E94 RPL23AP38-201ENST00000423801 469 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 OR5BE1P-201ENST00000425977 939 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 MOB1AP1-201ENST00000430903 535 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 RANP8-201ENST00000444720 713 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 MTND2P6-201ENST00000455337 1030 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 OR9N1P-202ENST00000494289 481 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC025459.1-201ENST00000504072 156 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 NDUFB4P9-201ENST00000511646 388 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC004923.2-201ENST00000529649 369 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.57□□□□□ -1.84
RFX4Q33E94 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 CYCSP29-201ENST00000533731 318 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX4Q33E94 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX4Q33E94 OR4H6P-202ENST00000603819 340 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AL049634.3-201ENST00000604968 457 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms