Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 AC022364.2-201ENST00000457963 554 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 snoU13.29-201ENST00000459370 104 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC007998.1-201ENST00000474156 672 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 RN7SL570P-201ENST00000484405 292 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 AC117522.3-201ENST00000507974 584 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC104057.1-201ENST00000515547 497 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 CENPUP1-201ENST00000526649 1202 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 SUB1P2-201ENST00000556401 297 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 AL163952.1-202ENST00000569625 600 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC060780.2-201ENST00000589047 198 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.39□□□□□ -1.39
ECM1Q16610 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.39□□□□□ -1.39
ECM1Q16610 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.39□□□□□ -1.39
ECM1Q16610 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ECM1Q16610 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.39□□□□□ -1.39
ECM1Q16610 FER-210ENST00000628534 558 ntTSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 AC020633.1-201ENST00000468439 2247 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.39□□□□□ -1.39
ECM1Q16610 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ECM1Q16610 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ECM1Q16610 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ECM1Q16610 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 SRRM1P3-201ENST00000426911 2678 ntBASIC6.39□□□□□ -1.39
ECM1Q16610 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.39□□□□□ -1.39
ECM1Q16610 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 RNA5SP326-201ENST00000363209 110 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 RNA5SP30-201ENST00000365552 115 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 RNU6-878P-201ENST00000384578 110 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.38□□□□□ -1.39
ECM1Q16610 HMGB3P20-201ENST00000417997 600 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC137499.1-201ENST00000427602 88 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AL136231.1-201ENST00000429407 730 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.38□□□□□ -1.39
ECM1Q16610 SEPT14P3-201ENST00000439401 183 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.38□□□□□ -1.39
ECM1Q16610 AL732372.2-207ENST00000445840 183 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AL445665.1-202ENST00000452436 324 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 SEPT14P2-201ENST00000453405 183 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 RPL38P1-201ENST00000460914 211 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC011005.3-201ENST00000491624 395 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 RPS4XP14-201ENST00000493072 781 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.38□□□□□ -1.39
ECM1Q16610 SEPT14P4-201ENST00000513445 186 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.38□□□□□ -1.39
ECM1Q16610 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.38□□□□□ -1.39
ECM1Q16610 FO082796.1-201ENST00000523795 183 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.38□□□□□ -1.39
ECM1Q16610 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 MIR4260-201ENST00000583107 67 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 AL117336.2-201ENST00000602435 335 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC007621.1-201ENST00000604544 437 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 AC093388.1-201ENST00000609166 430 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 AC123768.4-201ENST00000616244 701 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.38□□□□□ -1.39
ECM1Q16610 AP002505.2-201ENST00000623585 696 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 AP000473.2-201ENST00000602659 1537 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.38□□□□□ -1.39
ECM1Q16610 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ECM1Q16610 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.38□□□□□ -1.39
ECM1Q16610 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 AC068870.1-201ENST00000563737 2455 ntBASIC6.38□□□□□ -1.39
ECM1Q16610 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ECM1Q16610 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ECM1Q16610 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ECM1Q16610 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ECM1Q16610 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ECM1Q16610 HSPA8P14-201ENST00000552265 1805 ntBASIC6.37□□□□□ -1.39
ECM1Q16610 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ECM1Q16610 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms