Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 OR5BC1P-201ENST00000529327 739 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC025260.1-201ENST00000548858 430 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.35□□□□□ -1.87
USF2Q15853 AC008782.1-201ENST00000603386 430 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC079587.1-201ENST00000603846 277 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC112230.1-201ENST00000604342 547 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AL365400.2-201ENST00000605604 902 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC008121.2-201ENST00000614647 523 ntBASIC3.35□□□□□ -1.87
USF2Q15853 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 AC016717.3-201ENST00000624730 554 ntBASIC3.35□□□□□ -1.87
USF2Q15853 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AF001550.2-201ENST00000636643 217 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 MFSD8-242ENST00000641690 4199 ntBASIC3.35□□□□□ -1.87
USF2Q15853 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
USF2Q15853 AC024560.2-201ENST00000507981 1497 ntBASIC3.35□□□□□ -1.87
USF2Q15853 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USF2Q15853 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
USF2Q15853 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USF2Q15853 OR11H4-201ENST00000315409 1082 ntBASIC3.34□□□□□ -1.87
USF2Q15853 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USF2Q15853 AL139095.3-201ENST00000419672 1203 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC245028.1-201ENST00000423259 256 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.34□□□□□ -1.87
USF2Q15853 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.34□□□□□ -1.87
USF2Q15853 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC083863.1-201ENST00000438811 231 ntBASIC3.34□□□□□ -1.87
USF2Q15853 TPTE2P3-201ENST00000441562 1189 ntBASIC3.34□□□□□ -1.87
USF2Q15853 ARL2BPP10-201ENST00000446487 531 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC104308.1-201ENST00000454621 333 ntBASIC3.34□□□□□ -1.87
USF2Q15853 DHFRP3-201ENST00000455595 559 ntBASIC3.34□□□□□ -1.87
USF2Q15853 ARPC3P2-201ENST00000457786 533 ntBASIC3.34□□□□□ -1.87
USF2Q15853 RPL5P24-201ENST00000463742 885 ntBASIC3.34□□□□□ -1.87
USF2Q15853 RPL7P22-201ENST00000466005 733 ntBASIC3.34□□□□□ -1.87
USF2Q15853 RPL7P1-201ENST00000468161 747 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC104689.1-201ENST00000473356 768 ntBASIC3.34□□□□□ -1.87
USF2Q15853 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.34□□□□□ -1.87
USF2Q15853 AC016065.2-201ENST00000514530 444 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.34□□□□□ -1.87
USF2Q15853 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.34□□□□□ -1.87
USF2Q15853 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
USF2Q15853 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 MTCO3P22-201ENST00000603219 784 ntBASIC3.34□□□□□ -1.87
USF2Q15853 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 MIR6748-201ENST00000610433 71 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC007546.1-201ENST00000619452 559 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AP005019.3-201ENST00000620418 560 ntBASIC3.34□□□□□ -1.87
USF2Q15853 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.34□□□□□ -1.87
USF2Q15853 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
USF2Q15853 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USF2Q15853 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.88
USF2Q15853 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
USF2Q15853 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USF2Q15853 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
USF2Q15853 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
USF2Q15853 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USF2Q15853 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 MIR142-201ENST00000384835 87 ntBASIC3.33□□□□□ -1.88
USF2Q15853 MIR7-1-201ENST00000384871 110 ntBASIC3.33□□□□□ -1.88
USF2Q15853 MIR192-201ENST00000384915 110 ntBASIC3.33□□□□□ -1.88
USF2Q15853 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.33□□□□□ -1.88
USF2Q15853 PRRC2CP1-201ENST00000404428 159 ntBASIC3.33□□□□□ -1.88
USF2Q15853 RPS16P5-201ENST00000406501 404 ntBASIC3.33□□□□□ -1.88
USF2Q15853 MTCYBP24-201ENST00000420387 1106 ntBASIC3.33□□□□□ -1.88
USF2Q15853 RBMY1KP-201ENST00000423480 476 ntBASIC3.33□□□□□ -1.88
USF2Q15853 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.33□□□□□ -1.88
USF2Q15853 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 MORF4L1P4-201ENST00000450245 976 ntBASIC3.33□□□□□ -1.88
USF2Q15853 RPL12P26-201ENST00000452430 487 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.33□□□□□ -1.88
USF2Q15853 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 RN7SL738P-201ENST00000470264 297 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AC007688.1-201ENST00000475592 759 ntBASIC3.33□□□□□ -1.88
USF2Q15853 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.33□□□□□ -1.88
USF2Q15853 AC025554.1-201ENST00000505641 188 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 AC084783.1-201ENST00000565846 910 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms