Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 DDX6P1-205ENST00000441966 1436 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 DDX18P4-201ENST00000511690 1966 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKDCP78527 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKDCP78527 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 AC026333.2-201ENST00000542164 106 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKDCP78527 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PRKDCP78527 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 Z95327.2-201ENST00000414579 1873 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 EIF4EP1-201ENST00000422311 642 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 TOMM20P4-201ENST00000427861 435 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 RPL21P40-201ENST00000428586 483 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 IFNA11P-201ENST00000446352 526 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 RN7SKP244-201ENST00000516513 307 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKDCP78527 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.42□□□□□ -2.02
PRKDCP78527 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 AC008264.1-201ENST00000447612 367 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 CYCSP39-201ENST00000565821 309 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 LSM1P2-201ENST00000604911 322 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 AC243829.7-201ENST00000633081 225 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AC092435.4-201ENST00000623012 4159 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 AC010168.2-201ENST00000562691 5428 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.42□□□□□ -2.02
PRKDCP78527 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 SNORA7.4-201ENST00000384249 137 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKDCP78527 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.42□□□□□ -2.02
PRKDCP78527 RPS4XP6-201ENST00000477670 797 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 HMGB1P3-201ENST00000502802 616 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 SETP12-201ENST00000514068 805 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AC008489.1-201ENST00000524271 483 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AC234778.2-201ENST00000566241 354 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 HSPA8P4-201ENST00000511877 1920 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PRKDCP78527 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.42□□□□□ -2.02
PRKDCP78527 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 AC006480.1-201ENST00000449887 378 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 UBL5P3-201ENST00000475112 231 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AC108022.1-201ENST00000493466 478 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 AC138832.1-201ENST00000522871 556 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 AL121839.2-201ENST00000565058 6943 ntBASIC2.42□□□□□ -2.02
PRKDCP78527 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKDCP78527 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRKDCP78527 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 AC018529.3-201ENST00000624212 2254 ntBASIC2.41□□□□□ -2.02
PRKDCP78527 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.41□□□□□ -2.02
PRKDCP78527 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 HSPE1P6-201ENST00000479457 291 ntBASIC2.41□□□□□ -2.02
PRKDCP78527 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 TRAV15-201ENST00000556680 249 ntBASIC2.41□□□□□ -2.02
PRKDCP78527 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.41□□□□□ -2.02
PRKDCP78527 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKDCP78527 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.41□□□□□ -2.02
PRKDCP78527 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.41□□□□□ -2.02
PRKDCP78527 SEPT7P2-202ENST00000398921 823 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms