Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 SNORA70.2-201ENST00000364506 135 ntBASIC3.35□□□□□ -1.87
LSM6P62312 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
LSM6P62312 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM6P62312 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM6P62312 RPS27AP12-201ENST00000429552 465 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AL117339.2-201ENST00000430475 180 ntBASIC3.35□□□□□ -1.87
LSM6P62312 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM6P62312 Z74696.2-201ENST00000436514 498 ntBASIC3.35□□□□□ -1.87
LSM6P62312 RPL21P89-201ENST00000444021 467 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AL157884.3-201ENST00000448273 1184 ntBASIC3.35□□□□□ -1.87
LSM6P62312 BUD31P2-201ENST00000449374 300 ntBASIC3.35□□□□□ -1.87
LSM6P62312 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM6P62312 UBE2CP3-201ENST00000502715 450 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AC005921.1-201ENST00000510589 286 ntBASIC3.35□□□□□ -1.87
LSM6P62312 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM6P62312 PTP4A1P6-201ENST00000531034 478 ntBASIC3.35□□□□□ -1.87
LSM6P62312 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 AC008083.2-201ENST00000546707 476 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM6P62312 AC136624.4-201ENST00000573044 370 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM6P62312 AP005901.4-201ENST00000577336 569 ntBASIC3.35□□□□□ -1.87
LSM6P62312 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM6P62312 AL606490.9-201ENST00000603331 271 ntBASIC3.35□□□□□ -1.87
LSM6P62312 BRDTP1-201ENST00000605735 677 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM6P62312 MIR378J-201ENST00000611988 109 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AC020763.5-201ENST00000623298 430 ntBASIC3.35□□□□□ -1.87
LSM6P62312 RPL23AP61-201ENST00000623642 466 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 AC244205.2-202ENST00000635781 342 ntBASIC3.35□□□□□ -1.87
LSM6P62312 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
LSM6P62312 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
LSM6P62312 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LSM6P62312 MIR153-1-201ENST00000384914 90 ntBASIC3.34□□□□□ -1.87
LSM6P62312 ATP5F1P4-201ENST00000397288 746 ntBASIC3.34□□□□□ -1.87
LSM6P62312 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
LSM6P62312 HSPE1P8-201ENST00000406997 288 ntBASIC3.34□□□□□ -1.87
LSM6P62312 HMGB1P32-201ENST00000425971 565 ntBASIC3.34□□□□□ -1.87
LSM6P62312 RSL24D1P6-201ENST00000426934 401 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM6P62312 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 HMGN2P21-201ENST00000447764 270 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 RPS20P32-201ENST00000456044 356 ntBASIC3.34□□□□□ -1.87
LSM6P62312 OR9M1P-201ENST00000459641 921 ntBASIC3.34□□□□□ -1.87
LSM6P62312 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM6P62312 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 MTCO1P35-201ENST00000515270 228 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.34□□□□□ -1.87
LSM6P62312 PARP1P2-201ENST00000556806 195 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AC006960.3-201ENST00000561845 705 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 AC015726.1-201ENST00000602353 681 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM6P62312 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.87
LSM6P62312 CR392039.4-201ENST00000624968 501 ntBASIC3.34□□□□□ -1.87
LSM6P62312 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LSM6P62312 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM6P62312 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM6P62312 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LSM6P62312 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.34□□□□□ -1.88
LSM6P62312 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.34□□□□□ -1.88
LSM6P62312 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM6P62312 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM6P62312 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
LSM6P62312 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms