Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MIR6867-201ENST00000610636 67 ntBASIC3.02□□□□□ -1.93
LSM3P62310 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM3P62310 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LSM3P62310 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM3P62310 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM3P62310 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM3P62310 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LSM3P62310 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM3P62310 AC017071.1-201ENST00000564407 2204 ntBASIC3.01□□□□□ -1.93
LSM3P62310 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LSM3P62310 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 RNU6-1331P-201ENST00000363658 106 ntBASIC3.01□□□□□ -1.93
LSM3P62310 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LSM3P62310 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
LSM3P62310 MIR550A3-201ENST00000390735 95 ntBASIC3.01□□□□□ -1.93
LSM3P62310 AC098592.2-201ENST00000413158 265 ntBASIC3.01□□□□□ -1.93
LSM3P62310 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
LSM3P62310 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
LSM3P62310 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 HMGN2P7-201ENST00000456186 273 ntBASIC3.01□□□□□ -1.93
LSM3P62310 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM3P62310 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.01□□□□□ -1.93
LSM3P62310 AC068714.1-201ENST00000559623 800 ntBASIC3.01□□□□□ -1.93
LSM3P62310 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.01□□□□□ -1.93
LSM3P62310 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM3P62310 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM3P62310 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM3P62310 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM3P62310 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3□□□□□ -1.93
LSM3P62310 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LSM3P62310 MTCO1P14-201ENST00000441695 1559 ntBASIC3□□□□□ -1.93
LSM3P62310 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM3P62310 MTND5P24-201ENST00000438892 1767 ntBASIC3□□□□□ -1.93
LSM3P62310 AL592437.2-201ENST00000421655 2434 ntBASIC3□□□□□ -1.93
LSM3P62310 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM3P62310 AC005183.1-201ENST00000603687 1979 ntBASIC3□□□□□ -1.93
LSM3P62310 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM3P62310 OFD1P1Y-201ENST00000411756 1225 ntBASIC3□□□□□ -1.93
LSM3P62310 MTND4LP21-201ENST00000415303 295 ntBASIC3□□□□□ -1.93
LSM3P62310 AL591419.1-201ENST00000427423 339 ntBASIC3□□□□□ -1.93
LSM3P62310 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM3P62310 AC006466.1-201ENST00000438721 289 ntBASIC3□□□□□ -1.93
LSM3P62310 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3□□□□□ -1.93
LSM3P62310 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3□□□□□ -1.93
LSM3P62310 NUTF2P3-201ENST00000448540 384 ntBASIC3□□□□□ -1.93
LSM3P62310 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3□□□□□ -1.93
LSM3P62310 FTH1P9-201ENST00000513251 355 ntBASIC3□□□□□ -1.93
LSM3P62310 SNORA70.18-201ENST00000516696 98 ntBASIC3□□□□□ -1.93
LSM3P62310 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3□□□□□ -1.93
LSM3P62310 AC105036.1-201ENST00000566222 271 ntBASIC3□□□□□ -1.93
LSM3P62310 AC011477.5-201ENST00000586571 259 ntBASIC3□□□□□ -1.93
LSM3P62310 RNU1-30P-201ENST00000606575 163 ntBASIC3□□□□□ -1.93
LSM3P62310 AL445567.2-201ENST00000618935 498 ntBASIC3□□□□□ -1.93
LSM3P62310 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM3P62310 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3□□□□□ -1.93
LSM3P62310 UOX-205ENST00000640983 544 ntTSL 4 BASIC3□□□□□ -1.93
LSM3P62310 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM3P62310 MFSD8-220ENST00000641243 1422 ntBASIC3□□□□□ -1.93
LSM3P62310 CR788268.1-201ENST00000603931 1809 ntBASIC3□□□□□ -1.93
LSM3P62310 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
LSM3P62310 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM3P62310 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LSM3P62310 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
LSM3P62310 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM3P62310 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM3P62310 RNU6-213P-201ENST00000384051 104 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AC245054.2-201ENST00000415639 319 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AL356095.1-201ENST00000417217 199 ntBASIC2.99□□□□□ -1.93
LSM3P62310 MTND2P15-201ENST00000418575 892 ntBASIC2.99□□□□□ -1.93
LSM3P62310 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM3P62310 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM3P62310 OR4F13P-201ENST00000428478 931 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AC023141.6-201ENST00000429418 337 ntBASIC2.99□□□□□ -1.93
LSM3P62310 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM3P62310 OR2B8P-201ENST00000432841 938 ntBASIC2.99□□□□□ -1.93
LSM3P62310 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
LSM3P62310 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AC118282.1-201ENST00000506408 765 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AC119751.1-201ENST00000513357 765 ntBASIC2.99□□□□□ -1.93
LSM3P62310 SNORD116-26-201ENST00000516006 96 ntBASIC2.99□□□□□ -1.93
LSM3P62310 RNA5SP309-201ENST00000516670 106 ntBASIC2.99□□□□□ -1.93
LSM3P62310 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM3P62310 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM3P62310 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM3P62310 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms