Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 UBE2FP2-201ENST00000566646 462 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC005341.1-201ENST00000571086 708 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 SNORA59B-202ENST00000578183 701 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 MIR1273E-201ENST00000581165 102 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AP001180.3-201ENST00000582221 145 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 VN1R79P-201ENST00000593540 513 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL161729.4-201ENST00000604650 476 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC090578.1-201ENST00000604955 591 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC023813.4-201ENST00000607580 580 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC091304.9-201ENST00000612091 226 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC109583.2-201ENST00000617367 129 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL356321.1-201ENST00000621360 228 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC092079.1-201ENST00000558620 1985 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CLRN1P58418 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC006378.2-201ENST00000623178 2476 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 AP001029.2-203ENST00000589795 4910 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 RNU1-19P-201ENST00000363306 165 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 RNU6-289P-201ENST00000364093 107 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 RNU6-533P-201ENST00000384144 107 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 RNU6-921P-201ENST00000384361 107 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 RPS3AP3-201ENST00000411933 242 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.8□□□□□ -1.64
CLRN1P58418 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.8□□□□□ -1.64
CLRN1P58418 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC109583.1-201ENST00000432156 268 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 AL354710.1-201ENST00000453641 246 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 SEPT7P3-201ENST00000455017 621 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 OR6K1P-201ENST00000456766 971 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC006511.1-201ENST00000470614 315 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 PPIAP19-201ENST00000486414 492 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC022133.1-201ENST00000490961 571 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 PRDX4P1-201ENST00000507189 574 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.8□□□□□ -1.64
CLRN1P58418 SNORA18.6-201ENST00000516792 115 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.8□□□□□ -1.64
CLRN1P58418 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.8□□□□□ -1.64
CLRN1P58418 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC090515.3-201ENST00000560431 315 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC009977.1-201ENST00000586015 570 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC022916.3-201ENST00000592961 742 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 AL022394.1-201ENST00000606979 292 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC103710.1-201ENST00000610003 901 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AC126175.1-201ENST00000617041 758 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AL158209.2-201ENST00000619266 216 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 AL353796.1-201ENST00000561542 3241 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLRN1P58418 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLRN1P58418 AC004158.1-201ENST00000564508 4319 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 AP002907.1-201ENST00000606361 1430 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms