Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Z74696.2-201ENST00000436514 498 ntBASIC3.68□□□□□ -1.82
VSX2P58304 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AP002345.1-201ENST00000456493 928 ntBASIC3.68□□□□□ -1.82
VSX2P58304 RNU6-775P-201ENST00000459318 96 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AC069499.1-201ENST00000489433 509 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 HAUS1P1-201ENST00000505275 832 ntBASIC3.68□□□□□ -1.82
VSX2P58304 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 AC093853.1-201ENST00000515689 483 ntBASIC3.68□□□□□ -1.82
VSX2P58304 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
VSX2P58304 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.68□□□□□ -1.82
VSX2P58304 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.68□□□□□ -1.82
VSX2P58304 AC245389.1-201ENST00000605141 529 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 AC005344.1-201ENST00000613391 459 ntBASIC3.68□□□□□ -1.82
VSX2P58304 uc_338.9-201ENST00000617424 182 ntBASIC3.68□□□□□ -1.82
VSX2P58304 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 LINC00216-201ENST00000623548 1126 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AC009452.1-201ENST00000640823 606 ntBASIC3.68□□□□□ -1.82
VSX2P58304 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.68□□□□□ -1.82
VSX2P58304 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 MAPK10-373ENST00000641983 6772 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
VSX2P58304 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 AP004289.2-201ENST00000444413 1457 ntBASIC3.67□□□□□ -1.82
VSX2P58304 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.67□□□□□ -1.82
VSX2P58304 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
VSX2P58304 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VSX2P58304 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 AL359837.1-201ENST00000381357 287 ntBASIC3.67□□□□□ -1.82
VSX2P58304 MIR92A2-201ENST00000385299 75 ntBASIC3.67□□□□□ -1.82
VSX2P58304 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.67□□□□□ -1.82
VSX2P58304 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 MTND2P15-201ENST00000418575 892 ntBASIC3.67□□□□□ -1.82
VSX2P58304 AL138785.1-201ENST00000425821 331 ntBASIC3.67□□□□□ -1.82
VSX2P58304 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 AC087650.1-201ENST00000431445 468 ntBASIC3.67□□□□□ -1.82
VSX2P58304 AL356535.1-201ENST00000440335 398 ntBASIC3.67□□□□□ -1.82
VSX2P58304 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.67□□□□□ -1.82
VSX2P58304 AL157827.1-201ENST00000447622 132 ntBASIC3.67□□□□□ -1.82
VSX2P58304 HMGB3P21-201ENST00000452483 547 ntBASIC3.67□□□□□ -1.82
VSX2P58304 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.67□□□□□ -1.82
VSX2P58304 RNU6-1218P-201ENST00000458990 108 ntBASIC3.67□□□□□ -1.82
VSX2P58304 AC007688.1-201ENST00000475592 759 ntBASIC3.67□□□□□ -1.82
VSX2P58304 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.67□□□□□ -1.82
VSX2P58304 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.67□□□□□ -1.82
VSX2P58304 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.67□□□□□ -1.82
VSX2P58304 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.67□□□□□ -1.82
VSX2P58304 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.67□□□□□ -1.82
VSX2P58304 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.67□□□□□ -1.82
VSX2P58304 MIMT1-201ENST00000597105 1050 ntBASIC3.67□□□□□ -1.82
VSX2P58304 PSMA6P4-201ENST00000603247 718 ntBASIC3.67□□□□□ -1.82
VSX2P58304 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
VSX2P58304 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
VSX2P58304 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSX2P58304 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.67□□□□□ -1.82
VSX2P58304 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VSX2P58304 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VSX2P58304 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VSX2P58304 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VSX2P58304 U1.1-201ENST00000384101 164 ntBASIC3.66□□□□□ -1.82
VSX2P58304 MIR199A2-201ENST00000385289 110 ntBASIC3.66□□□□□ -1.82
VSX2P58304 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 SNORA57.3-201ENST00000411095 141 ntBASIC3.66□□□□□ -1.82
VSX2P58304 AL445584.1-201ENST00000431451 330 ntBASIC3.66□□□□□ -1.82
VSX2P58304 MTCO1P57-201ENST00000432182 261 ntBASIC3.66□□□□□ -1.82
VSX2P58304 BMS1P19-201ENST00000433925 393 ntBASIC3.66□□□□□ -1.82
VSX2P58304 AC245517.2-201ENST00000442890 346 ntBASIC3.66□□□□□ -1.82
VSX2P58304 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 SNRPGP5-201ENST00000456003 220 ntBASIC3.66□□□□□ -1.82
VSX2P58304 RN7SL542P-201ENST00000467147 294 ntBASIC3.66□□□□□ -1.82
VSX2P58304 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 SCARNA14-201ENST00000516903 136 ntBASIC3.66□□□□□ -1.82
VSX2P58304 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 AC023158.1-201ENST00000561632 1025 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms