Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 RN7SKP113-201ENST00000363891 295 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 RNU1-130P-201ENST00000363930 160 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 RNU4-91P-201ENST00000364778 135 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 Y_RNA.553-201ENST00000384670 102 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 MIR600-201ENST00000385007 98 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 MIR223-201ENST00000385204 110 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SUMO3P55854 DHFRP6-201ENST00000401776 268 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 RPS24P12-201ENST00000402084 394 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 RPL12P9-201ENST00000412942 488 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 TPMTP2-201ENST00000414372 726 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 FNDC3CP-201ENST00000420795 1155 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 AL117351.1-201ENST00000438864 766 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 TCEA1P3-201ENST00000443005 880 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AP000936.2-201ENST00000447151 681 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 MTCO1P27-201ENST00000448269 226 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 RN7SL515P-201ENST00000463999 297 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC091564.1-201ENST00000464563 479 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 RN7SKP277-201ENST00000516895 283 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.72□□□□□ -1.65
SUMO3P55854 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 AP000873.5-201ENST00000533906 236 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC090022.1-201ENST00000546569 311 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC006349.1-201ENST00000555526 235 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC012414.6-201ENST00000568241 401 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.72□□□□□ -1.65
SUMO3P55854 RSL24D1P11-201ENST00000591045 491 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 AC068790.2-201ENST00000602601 557 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 MIR6826-201ENST00000617808 98 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC009878.1-201ENST00000621819 340 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC000123.2-201ENST00000623124 461 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC098679.4-201ENST00000624241 654 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 AL596275.2-204ENST00000641628 552 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AL596275.2-206ENST00000641957 626 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 AL356473.1-201ENST00000406203 1408 ntBASIC4.72□□□□□ -1.65
SUMO3P55854 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SUMO3P55854 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
SUMO3P55854 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SUMO3P55854 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SUMO3P55854 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SUMO3P55854 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SUMO3P55854 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.71□□□□□ -1.66
SUMO3P55854 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.71□□□□□ -1.66
SUMO3P55854 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SUMO3P55854 OR9K1P-201ENST00000326513 941 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 RNU6-952P-201ENST00000391164 108 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 RPL21P67-201ENST00000402896 478 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 DUTP5-201ENST00000406790 469 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.71□□□□□ -1.66
SUMO3P55854 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.71□□□□□ -1.66
SUMO3P55854 RPL35AP24-201ENST00000413846 330 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 DDX39BP1-205ENST00000422507 192 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 EI24P4-201ENST00000423683 1078 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 COX6CP12-201ENST00000446748 202 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 EPS15P1-201ENST00000448836 336 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 BX276092.4-201ENST00000452056 248 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 VN1R32P-201ENST00000452234 905 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.71□□□□□ -1.66
SUMO3P55854 AL389915.2-201ENST00000454576 441 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 RNA5SP269-201ENST00000459032 137 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 PABPC1P3-201ENST00000469174 459 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 RPL31P50-201ENST00000471002 296 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 RPS4XP1-201ENST00000482189 787 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 AC093767.1-201ENST00000504523 156 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 POU5F1P7-201ENST00000508759 541 ntBASIC4.71□□□□□ -1.66
SUMO3P55854 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms