Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR4284-201ENST00000578924 81 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC115085.1-201ENST00000588924 229 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 OR4H6P-202ENST00000603819 340 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC091167.4-201ENST00000605079 184 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 ARF4P1-201ENST00000605447 541 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL450270.1-201ENST00000606160 391 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC011374.2-201ENST00000607135 526 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 CR392039.4-201ENST00000624968 501 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 HPVC1-201ENST00000629899 1198 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC244205.2-202ENST00000635781 342 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 OR52H1-202ENST00000641796 1061 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PKNOX1P55347 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKNOX1P55347 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.78□□□□□ -1.8
PKNOX1P55347 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.77□□□□□ -1.81
PKNOX1P55347 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PKNOX1P55347 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PKNOX1P55347 RAD1P1-201ENST00000231383 813 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 RNU6-98P-201ENST00000384173 107 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.77□□□□□ -1.81
PKNOX1P55347 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.77□□□□□ -1.81
PKNOX1P55347 FO393419.3-201ENST00000428741 282 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AL513321.1-201ENST00000441175 761 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.77□□□□□ -1.81
PKNOX1P55347 CEACAMP9-201ENST00000442990 513 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 NUTF2P3-201ENST00000448540 384 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC108729.2-201ENST00000476543 840 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.77□□□□□ -1.81
PKNOX1P55347 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.77□□□□□ -1.81
PKNOX1P55347 CR383656.6-201ENST00000550518 394 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AC233266.2-201ENST00000567067 528 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 MTND4LP24-201ENST00000572277 291 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC011477.5-201ENST00000586571 259 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC020910.2-201ENST00000603635 610 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AC115621.1-201ENST00000604653 858 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AC091905.1-201ENST00000624400 311 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PKNOX1P55347 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PKNOX1P55347 AL163152.1-201ENST00000642001 374 ntBASIC3.77□□□□□ -1.81
PKNOX1P55347 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PKNOX1P55347 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PKNOX1P55347 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKNOX1P55347 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
PKNOX1P55347 MTND4P10-201ENST00000446199 1363 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PKNOX1P55347 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PKNOX1P55347 RPS4XP5-202ENST00000449995 1334 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
PKNOX1P55347 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 RNU2-17P-201ENST00000410290 190 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AL691449.1-201ENST00000426570 421 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AC073143.1-201ENST00000436316 395 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 RPL23AP23-201ENST00000452590 471 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.76□□□□□ -1.81
PKNOX1P55347 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.76□□□□□ -1.81
PKNOX1P55347 TRBV12-2-201ENST00000489763 344 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 RN7SKP141-201ENST00000516167 338 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 CDH12P4-201ENST00000517835 295 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 CDH12P3-201ENST00000517935 295 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 CDH12P1-201ENST00000518435 295 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AC034205.1-201ENST00000520621 638 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 OR4A2P-201ENST00000527276 913 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
PKNOX1P55347 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms