Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH4P55283 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH4P55283 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH4P55283 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH4P55283 HSPE1P5-201ENST00000561489 272 ntBASIC3.99□□□□□ -1.77
CDH4P55283 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH4P55283 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH4P55283 AC067852.4-201ENST00000590314 478 ntBASIC3.99□□□□□ -1.77
CDH4P55283 AC069304.3-201ENST00000603938 1084 ntBASIC3.99□□□□□ -1.77
CDH4P55283 AC099669.2-201ENST00000616549 437 ntBASIC3.99□□□□□ -1.77
CDH4P55283 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH4P55283 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.99□□□□□ -1.77
CDH4P55283 FP236240.3-201ENST00000623061 327 ntBASIC3.99□□□□□ -1.77
CDH4P55283 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH4P55283 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH4P55283 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
CDH4P55283 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH4P55283 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH4P55283 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH4P55283 AL139811.1-201ENST00000424779 2299 ntBASIC3.98□□□□□ -1.77
CDH4P55283 MTND4P31-201ENST00000425607 1343 ntBASIC3.98□□□□□ -1.77
CDH4P55283 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH4P55283 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH4P55283 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH4P55283 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDH4P55283 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDH4P55283 MIR1183-201ENST00000408856 89 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC234782.4-201ENST00000417646 1048 ntBASIC3.98□□□□□ -1.77
CDH4P55283 MTND2P15-201ENST00000418575 892 ntBASIC3.98□□□□□ -1.77
CDH4P55283 RPS12P23-201ENST00000419579 400 ntBASIC3.98□□□□□ -1.77
CDH4P55283 FO393419.3-201ENST00000428741 282 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC011742.1-201ENST00000431448 434 ntBASIC3.98□□□□□ -1.77
CDH4P55283 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH4P55283 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH4P55283 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH4P55283 OR9N1P-202ENST00000494289 481 ntBASIC3.98□□□□□ -1.77
CDH4P55283 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH4P55283 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH4P55283 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH4P55283 OR5H4P-201ENST00000510851 923 ntBASIC3.98□□□□□ -1.77
CDH4P55283 FTH1P9-201ENST00000513251 355 ntBASIC3.98□□□□□ -1.77
CDH4P55283 RN7SKP141-201ENST00000516167 338 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH4P55283 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH4P55283 HAUS1P3-201ENST00000523909 662 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH4P55283 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH4P55283 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
CDH4P55283 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH4P55283 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH4P55283 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH4P55283 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH4P55283 BX322635.1-201ENST00000605804 496 ntBASIC3.98□□□□□ -1.77
CDH4P55283 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH4P55283 AC103858.2-201ENST00000621471 543 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC104820.1-201ENST00000624183 307 ntBASIC3.98□□□□□ -1.77
CDH4P55283 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH4P55283 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CDH4P55283 ZNF962P-201ENST00000443465 3140 ntBASIC3.98□□□□□ -1.77
CDH4P55283 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
CDH4P55283 AC009501.3-201ENST00000605001 1352 ntBASIC3.98□□□□□ -1.77
CDH4P55283 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CDH4P55283 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH4P55283 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH4P55283 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH4P55283 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH4P55283 AC007685.1-201ENST00000329806 452 ntBASIC3.97□□□□□ -1.77
CDH4P55283 RNU1-87P-201ENST00000363727 170 ntBASIC3.97□□□□□ -1.77
CDH4P55283 SNORD74.4-201ENST00000364129 80 ntBASIC3.97□□□□□ -1.77
CDH4P55283 U1.1-201ENST00000384101 164 ntBASIC3.97□□□□□ -1.77
CDH4P55283 MIR30B-201ENST00000384850 88 ntBASIC3.97□□□□□ -1.77
CDH4P55283 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 MTCO3P4-201ENST00000419236 787 ntBASIC3.97□□□□□ -1.77
CDH4P55283 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH4P55283 AL590623.1-201ENST00000427864 105 ntBASIC3.97□□□□□ -1.77
CDH4P55283 NANOGP6-201ENST00000429190 847 ntBASIC3.97□□□□□ -1.77
CDH4P55283 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.97□□□□□ -1.77
CDH4P55283 KCTD10P1-201ENST00000434203 625 ntBASIC3.97□□□□□ -1.77
CDH4P55283 RPS17P13-201ENST00000448974 407 ntBASIC3.97□□□□□ -1.77
CDH4P55283 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 RPL37P3-201ENST00000456825 293 ntBASIC3.97□□□□□ -1.77
CDH4P55283 AC091959.2-201ENST00000477363 321 ntBASIC3.97□□□□□ -1.77
CDH4P55283 RNA5SP164-201ENST00000516533 110 ntBASIC3.97□□□□□ -1.77
CDH4P55283 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH4P55283 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH4P55283 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 POLR2KP1-201ENST00000553226 168 ntBASIC3.97□□□□□ -1.77
CDH4P55283 MTATP6P25-201ENST00000574491 261 ntBASIC3.97□□□□□ -1.77
CDH4P55283 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
CDH4P55283 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH4P55283 MRPS35P3-201ENST00000603189 709 ntBASIC3.97□□□□□ -1.77
CDH4P55283 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDH4P55283 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH4P55283 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
CDH4P55283 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH4P55283 SAGE2P-201ENST00000420011 2126 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms