Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD4P46934 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.44□□□□□ -1.7
NEDD4P46934 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD4P46934 AC122134.1-201ENST00000565664 1104 ntBASIC4.44□□□□□ -1.7
NEDD4P46934 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.44□□□□□ -1.7
NEDD4P46934 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.44□□□□□ -1.7
NEDD4P46934 AC005776.1-201ENST00000603164 290 ntBASIC4.44□□□□□ -1.7
NEDD4P46934 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.44□□□□□ -1.7
NEDD4P46934 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD4P46934 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 MFSD8-236ENST00000641509 4050 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 GCNT6-201ENST00000379591 934 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 HLFP1-201ENST00000402375 499 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD4P46934 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC002553.2-201ENST00000453217 340 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 UBA52P3-201ENST00000491303 382 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC020593.1-201ENST00000507399 299 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.43□□□□□ -1.7
NEDD4P46934 HMGN1P15-201ENST00000513870 295 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD4P46934 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 AL358913.1-201ENST00000554342 121 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC034105.4-201ENST00000568304 277 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC015911.5-201ENST00000587076 451 ntBASIC4.43□□□□□ -1.7
NEDD4P46934 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.43□□□□□ -1.7
NEDD4P46934 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD4P46934 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD4P46934 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD4P46934 AL592494.2-201ENST00000425455 1548 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 RNU4-31P-201ENST00000384211 141 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 HMGB1P10-201ENST00000395823 563 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 AL136131.1-201ENST00000406079 803 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 RN7SKP202-201ENST00000410439 330 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 SNORA57.3-201ENST00000411095 141 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD4P46934 UBE2D3P3-201ENST00000426992 425 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 AL160175.1-201ENST00000428124 247 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 CDC27P1-201ENST00000445384 715 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 MTND2P39-201ENST00000457230 764 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AC015908.1-201ENST00000478739 476 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD4P46934 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 MTCO2P9-201ENST00000503214 694 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD4P46934 MTCO1P4-201ENST00000520516 1409 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 OR7E13P-201ENST00000526052 910 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 AC008011.1-201ENST00000545989 227 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD4P46934 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 AC141257.3-201ENST00000572906 215 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 DNAJC19P3-201ENST00000594491 331 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD4P46934 AL356274.1-201ENST00000617064 410 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AL356863.1-201ENST00000623378 1080 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 AC091905.1-201ENST00000624400 311 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD4P46934 FRG1DP-201ENST00000635586 771 ntBASIC4.42□□□□□ -1.7
NEDD4P46934 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD4P46934 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 AL627171.1-201ENST00000618845 1308 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD4P46934 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms