Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RPL34P26-201ENST00000445636 354 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
BRCC3P46736 AC104306.1-201ENST00000449702 371 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 NANOGP10-201ENST00000453325 895 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.16□□□□□ -1.74
BRCC3P46736 VN1R40P-201ENST00000455196 941 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC005229.2-201ENST00000456995 399 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 RPS20P21-201ENST00000466859 343 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.16□□□□□ -1.74
BRCC3P46736 AC107398.1-201ENST00000486904 505 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC005912.1-201ENST00000495392 255 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.16□□□□□ -1.74
BRCC3P46736 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
BRCC3P46736 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.16□□□□□ -1.74
BRCC3P46736 AC004923.2-201ENST00000529649 369 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRCC3P46736 OR4A12P-201ENST00000530847 918 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.16□□□□□ -1.74
BRCC3P46736 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.16□□□□□ -1.74
BRCC3P46736 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.16□□□□□ -1.74
BRCC3P46736 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.16□□□□□ -1.74
BRCC3P46736 AC069240.1-201ENST00000548774 375 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC093014.1-201ENST00000548926 724 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.16□□□□□ -1.74
BRCC3P46736 AL109741.3-201ENST00000561748 592 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 BNIP3P33-201ENST00000598912 569 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 KATNBL1P5-201ENST00000605015 517 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC116447.1-201ENST00000613153 453 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 AC005344.1-201ENST00000613391 459 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCC3P46736 AF001550.2-201ENST00000636643 217 ntBASIC4.16□□□□□ -1.74
BRCC3P46736 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.16□□□□□ -1.74
BRCC3P46736 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCC3P46736 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
BRCC3P46736 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.16□□□□□ -1.74
BRCC3P46736 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCC3P46736 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
BRCC3P46736 AC096656.1-201ENST00000623826 1364 ntBASIC4.15□□□□□ -1.74
BRCC3P46736 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
BRCC3P46736 AC009229.4-201ENST00000623854 1947 ntBASIC4.15□□□□□ -1.74
BRCC3P46736 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.74
BRCC3P46736 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.15□□□□□ -1.74
BRCC3P46736 RNU6-984P-201ENST00000363236 109 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 GCNT6-201ENST00000379591 934 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 RNA5SP104-201ENST00000410989 118 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 MTND2P15-201ENST00000418575 892 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AL353597.2-202ENST00000434901 373 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.15□□□□□ -1.75
BRCC3P46736 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BRCC3P46736 VN1R34P-201ENST00000447387 883 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 MTND2P39-201ENST00000457230 764 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 RPL21P11-201ENST00000461458 483 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC034236.1-201ENST00000469891 373 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 MTND3P3-201ENST00000505004 126 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC010468.3-201ENST00000508225 458 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 VWA8P1-201ENST00000510889 176 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC027338.1-201ENST00000514840 825 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC112206.4-201ENST00000515142 405 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 RNU6-347P-201ENST00000516658 105 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC022695.1-201ENST00000522089 237 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC007991.1-201ENST00000522680 631 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.15□□□□□ -1.75
BRCC3P46736 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.15□□□□□ -1.75
BRCC3P46736 AC233266.2-201ENST00000567067 528 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.15□□□□□ -1.75
BRCC3P46736 AC053481.3-201ENST00000577881 843 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 AC022884.3-201ENST00000579571 248 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.15□□□□□ -1.75
BRCC3P46736 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 AL139089.1-201ENST00000620372 975 ntBASIC4.15□□□□□ -1.75
BRCC3P46736 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRCC3P46736 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRCC3P46736 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.15□□□□□ -1.75
BRCC3P46736 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BRCC3P46736 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRCC3P46736 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.14□□□□□ -1.75
BRCC3P46736 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.14□□□□□ -1.75
BRCC3P46736 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BRCC3P46736 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.14□□□□□ -1.75
BRCC3P46736 AP004289.2-201ENST00000444413 1457 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 RHOT1P2-201ENST00000366423 333 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 SNORD3H-201ENST00000384486 214 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 MIR200C-201ENST00000384980 68 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 HSPD1P16-201ENST00000402302 394 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 AL139247.1-201ENST00000422768 325 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.14□□□□□ -1.75
BRCC3P46736 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 NPM1P34-201ENST00000428821 893 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 RPL37P1-201ENST00000432310 284 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 HMGB1P37-201ENST00000439613 609 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
BRCC3P46736 NDUFS5P3-201ENST00000450668 321 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms