Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSR1P43307 CCT8P1-201ENST00000413611 1657 ntBASIC4.24□□□□□ -1.73
SSR1P43307 RIOK3P1-201ENST00000418778 1528 ntBASIC4.24□□□□□ -1.73
SSR1P43307 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSR1P43307 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSR1P43307 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSR1P43307 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSR1P43307 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SSR1P43307 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSR1P43307 RNA5SP295-201ENST00000362655 121 ntBASIC4.23□□□□□ -1.73
SSR1P43307 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SSR1P43307 RPL30P2-201ENST00000414021 291 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AL691447.1-201ENST00000419456 387 ntBASIC4.23□□□□□ -1.73
SSR1P43307 USP12PY-201ENST00000427677 1064 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.23□□□□□ -1.73
SSR1P43307 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.23□□□□□ -1.73
SSR1P43307 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.23□□□□□ -1.73
SSR1P43307 AC091167.1-201ENST00000492017 396 ntBASIC4.23□□□□□ -1.73
SSR1P43307 FTH1P24-201ENST00000503502 462 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 HMGB1P47-201ENST00000511281 589 ntBASIC4.23□□□□□ -1.73
SSR1P43307 PHBP14-201ENST00000512887 367 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC010265.1-201ENST00000513509 211 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.23□□□□□ -1.73
SSR1P43307 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 UBE2NP1-201ENST00000545592 458 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC008083.2-201ENST00000546707 476 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC023158.1-201ENST00000561632 1025 ntBASIC4.23□□□□□ -1.73
SSR1P43307 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 AC010735.1-201ENST00000567305 1026 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC023575.1-201ENST00000580510 358 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.23□□□□□ -1.73
SSR1P43307 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.23□□□□□ -1.73
SSR1P43307 AL365400.2-201ENST00000605604 902 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.23□□□□□ -1.73
SSR1P43307 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSR1P43307 AC244205.2-202ENST00000635781 342 ntBASIC4.23□□□□□ -1.73
SSR1P43307 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.23□□□□□ -1.73
SSR1P43307 AC119674.1-220ENST00000641502 1048 ntBASIC4.23□□□□□ -1.73
SSR1P43307 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.23□□□□□ -1.73
SSR1P43307 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSR1P43307 AL359715.4-201ENST00000606629 1436 ntBASIC4.22□□□□□ -1.73
SSR1P43307 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
SSR1P43307 RNU1-32P-201ENST00000363937 159 ntBASIC4.22□□□□□ -1.73
SSR1P43307 BTF3P9-201ENST00000418784 283 ntBASIC4.22□□□□□ -1.73
SSR1P43307 TCEA1P2-201ENST00000420496 906 ntBASIC4.22□□□□□ -1.73
SSR1P43307 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.22□□□□□ -1.73
SSR1P43307 AC096638.2-201ENST00000434965 711 ntBASIC4.22□□□□□ -1.73
SSR1P43307 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
SSR1P43307 AL157827.1-201ENST00000447622 132 ntBASIC4.22□□□□□ -1.73
SSR1P43307 NPM1P49-201ENST00000448027 714 ntBASIC4.22□□□□□ -1.73
SSR1P43307 NUTF2P3-201ENST00000448540 384 ntBASIC4.22□□□□□ -1.73
SSR1P43307 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
SSR1P43307 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 HMGB3P15-201ENST00000507326 574 ntBASIC4.22□□□□□ -1.73
SSR1P43307 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 AC026726.1-201ENST00000512859 601 ntBASIC4.22□□□□□ -1.73
SSR1P43307 SNORA70.17-201ENST00000516449 133 ntBASIC4.22□□□□□ -1.73
SSR1P43307 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.22□□□□□ -1.73
SSR1P43307 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.22□□□□□ -1.73
SSR1P43307 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSR1P43307 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 MIR4284-201ENST00000578924 81 ntBASIC4.22□□□□□ -1.73
SSR1P43307 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
SSR1P43307 MIR8059-201ENST00000620427 81 ntBASIC4.22□□□□□ -1.73
SSR1P43307 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.22□□□□□ -1.73
SSR1P43307 AC124312.6-202ENST00000623624 418 ntBASIC4.22□□□□□ -1.73
SSR1P43307 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.22□□□□□ -1.73
SSR1P43307 MIR7153-201ENST00000637758 57 ntBASIC4.22□□□□□ -1.73
SSR1P43307 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SSR1P43307 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSR1P43307 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SSR1P43307 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSR1P43307 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.21□□□□□ -1.73
SSR1P43307 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.21□□□□□ -1.73
SSR1P43307 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.21□□□□□ -1.73
SSR1P43307 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.73
SSR1P43307 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
SSR1P43307 ZNF33CP-201ENST00000432492 2030 ntBASIC4.21□□□□□ -1.74
SSR1P43307 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.21□□□□□ -1.74
SSR1P43307 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SSR1P43307 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSR1P43307 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSR1P43307 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSR1P43307 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSR1P43307 RAD1P1-201ENST00000231383 813 ntBASIC4.21□□□□□ -1.74
SSR1P43307 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSR1P43307 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.21□□□□□ -1.74
SSR1P43307 OR6C69P-201ENST00000394268 893 ntBASIC4.21□□□□□ -1.74
SSR1P43307 RFESDP1-201ENST00000422350 461 ntBASIC4.21□□□□□ -1.74
SSR1P43307 RPL18P10-201ENST00000425606 538 ntBASIC4.21□□□□□ -1.74
SSR1P43307 SNORA71B-202ENST00000439232 272 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms