Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MTND1P8-201ENST00000571424 950 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.3□□□□□ -1.72
HNF4AP41235 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.3□□□□□ -1.72
HNF4AP41235 AC068790.7-201ENST00000602347 528 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC068620.3-201ENST00000602749 560 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC090912.3-201ENST00000609775 533 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC018926.1-201ENST00000616335 435 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC008147.4-201ENST00000617570 1204 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 AC091046.2-201ENST00000620775 665 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.3□□□□□ -1.72
HNF4AP41235 OR4G3P-201ENST00000633500 913 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.3□□□□□ -1.72
HNF4AP41235 AC099654.8-201ENST00000637757 681 ntBASIC4.3□□□□□ -1.72
HNF4AP41235 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.3□□□□□ -1.72
HNF4AP41235 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HNF4AP41235 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.3□□□□□ -1.72
HNF4AP41235 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HNF4AP41235 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.3□□□□□ -1.72
HNF4AP41235 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HNF4AP41235 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
HNF4AP41235 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HNF4AP41235 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
HNF4AP41235 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
HNF4AP41235 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
HNF4AP41235 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HNF4AP41235 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HNF4AP41235 RNU6-1000P-201ENST00000391066 106 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AP002784.2-201ENST00000397300 549 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 RPS20P14-201ENST00000412545 360 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.29□□□□□ -1.72
HNF4AP41235 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.29□□□□□ -1.72
HNF4AP41235 AL645931.1-201ENST00000439737 410 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 RPL5P32-201ENST00000454085 879 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 OR5H3P-201ENST00000502817 919 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.29□□□□□ -1.72
HNF4AP41235 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HNF4AP41235 IGLVIV-65-201ENST00000517313 360 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AP003355.1-201ENST00000518956 587 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 HIGD1AP6-201ENST00000521833 279 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 IGJP1-201ENST00000522682 475 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 OR4R3P-201ENST00000525084 838 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.29□□□□□ -1.72
HNF4AP41235 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HNF4AP41235 AC011611.5-201ENST00000552477 578 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AC023824.3-201ENST00000569003 562 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.29□□□□□ -1.72
HNF4AP41235 AC124283.4-201ENST00000581815 456 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AL049634.3-201ENST00000604968 457 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AP005019.3-201ENST00000620418 560 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AC004808.1-201ENST00000627671 721 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 AC068620.4-201ENST00000636730 1182 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.29□□□□□ -1.72
HNF4AP41235 PABPC1P7-201ENST00000413177 1513 ntBASIC4.29□□□□□ -1.72
HNF4AP41235 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HNF4AP41235 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HNF4AP41235 AC025263.3-201ENST00000622965 1396 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 RAD17P1-201ENST00000418130 2042 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 RNA5SP104-201ENST00000410989 118 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RN7SKP167-201ENST00000411047 285 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RN7SKP216-201ENST00000411050 312 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RPL31P2-201ENST00000413849 377 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC115285.1-201ENST00000424879 736 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 RPL36P19-201ENST00000430744 301 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC002542.1-201ENST00000440683 193 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 HSFY3P-201ENST00000444242 1191 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AL606517.1-201ENST00000446914 387 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 GTF2IP12-201ENST00000456547 356 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms