Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC3P40938 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.65□□□□□ -1.83
RFC3P40938 AC109458.1-201ENST00000508858 316 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AC010285.3-201ENST00000511668 676 ntBASIC3.65□□□□□ -1.83
RFC3P40938 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.83
RFC3P40938 RNU6-352P-201ENST00000516908 107 ntBASIC3.65□□□□□ -1.83
RFC3P40938 RNA5SP179-201ENST00000517284 121 ntBASIC3.65□□□□□ -1.83
RFC3P40938 NARSP2-201ENST00000518524 679 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AC022790.1-201ENST00000522872 204 ntBASIC3.65□□□□□ -1.83
RFC3P40938 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.65□□□□□ -1.83
RFC3P40938 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.65□□□□□ -1.83
RFC3P40938 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 OR4U1P-201ENST00000554958 912 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC3P40938 AC091167.4-201ENST00000605079 184 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 AC090912.3-201ENST00000609775 533 ntBASIC3.65□□□□□ -1.83
RFC3P40938 U7.8-201ENST00000619968 63 ntBASIC3.65□□□□□ -1.83
RFC3P40938 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC3P40938 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.65□□□□□ -1.83
RFC3P40938 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC3P40938 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 AC007685.1-201ENST00000329806 452 ntBASIC3.64□□□□□ -1.83
RFC3P40938 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 TCEA1P4-201ENST00000415066 844 ntBASIC3.64□□□□□ -1.83
RFC3P40938 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 GOT2P5-201ENST00000433995 546 ntBASIC3.64□□□□□ -1.83
RFC3P40938 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 HMGB1P5-202ENST00000451497 985 ntBASIC3.64□□□□□ -1.83
RFC3P40938 OR9M1P-201ENST00000459641 921 ntBASIC3.64□□□□□ -1.83
RFC3P40938 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 SNORA67.7-201ENST00000516664 135 ntBASIC3.64□□□□□ -1.83
RFC3P40938 RNA5SP143-201ENST00000516936 115 ntBASIC3.64□□□□□ -1.83
RFC3P40938 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.64□□□□□ -1.83
RFC3P40938 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 MIR4458-201ENST00000578872 75 ntBASIC3.64□□□□□ -1.83
RFC3P40938 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 MIR3158-1-201ENST00000583596 81 ntBASIC3.64□□□□□ -1.83
RFC3P40938 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 AP003117.1-201ENST00000602771 554 ntBASIC3.64□□□□□ -1.83
RFC3P40938 Z82195.1-201ENST00000604558 398 ntBASIC3.64□□□□□ -1.83
RFC3P40938 MIR432-201ENST00000606207 94 ntBASIC3.64□□□□□ -1.83
RFC3P40938 MIR486-1-201ENST00000612171 68 ntBASIC3.64□□□□□ -1.83
RFC3P40938 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.64□□□□□ -1.83
RFC3P40938 AL354798.1-201ENST00000622505 329 ntBASIC3.64□□□□□ -1.83
RFC3P40938 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
RFC3P40938 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
RFC3P40938 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RFC3P40938 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC3P40938 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFC3P40938 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 RNU6-452P-201ENST00000384406 107 ntBASIC3.63□□□□□ -1.83
RFC3P40938 MIR30B-201ENST00000384850 88 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AL389915.1-201ENST00000422463 466 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AL356535.1-201ENST00000440335 398 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
RFC3P40938 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms