Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP1P30622 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP1P30622 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLIP1P30622 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLIP1P30622 AL391417.1-201ENST00000404100 426 ntBASIC5.46□□□□□ -1.54
CLIP1P30622 OR4K6P-201ENST00000416478 897 ntBASIC5.46□□□□□ -1.54
CLIP1P30622 HMGB3P9-201ENST00000441799 583 ntBASIC5.46□□□□□ -1.54
CLIP1P30622 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.46□□□□□ -1.54
CLIP1P30622 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP1P30622 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.46□□□□□ -1.54
CLIP1P30622 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP1P30622 MIR4325-201ENST00000583049 90 ntBASIC5.46□□□□□ -1.54
CLIP1P30622 AL354976.1-201ENST00000613843 387 ntBASIC5.46□□□□□ -1.54
CLIP1P30622 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CLIP1P30622 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CLIP1P30622 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
CLIP1P30622 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.45□□□□□ -1.54
CLIP1P30622 OR1AA1P-201ENST00000419597 916 ntBASIC5.45□□□□□ -1.54
CLIP1P30622 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP1P30622 Z75741.1-201ENST00000446793 314 ntBASIC5.45□□□□□ -1.54
CLIP1P30622 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 FCF1P8-201ENST00000510322 597 ntBASIC5.45□□□□□ -1.54
CLIP1P30622 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.45□□□□□ -1.54
CLIP1P30622 MIR4276-201ENST00000584832 70 ntBASIC5.45□□□□□ -1.54
CLIP1P30622 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP1P30622 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP1P30622 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP1P30622 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP1P30622 RNA5SP235-201ENST00000365411 114 ntBASIC5.44□□□□□ -1.54
CLIP1P30622 BMS1P3-201ENST00000372011 932 ntBASIC5.44□□□□□ -1.54
CLIP1P30622 SNORA48.2-201ENST00000390926 124 ntBASIC5.44□□□□□ -1.54
CLIP1P30622 Z99755.1-201ENST00000414048 380 ntBASIC5.44□□□□□ -1.54
CLIP1P30622 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP1P30622 AC112198.1-201ENST00000505369 1220 ntBASIC5.44□□□□□ -1.54
CLIP1P30622 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP1P30622 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP1P30622 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP1P30622 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP1P30622 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP1P30622 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP1P30622 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP1P30622 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP1P30622 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP1P30622 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP1P30622 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP1P30622 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP1P30622 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP1P30622 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP1P30622 FCF1P3-201ENST00000496394 590 ntBASIC5.43□□□□□ -1.54
CLIP1P30622 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 RNU1-103P-201ENST00000516502 125 ntBASIC5.43□□□□□ -1.54
CLIP1P30622 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP1P30622 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.43□□□□□ -1.54
CLIP1P30622 AC092868.3-201ENST00000560515 784 ntBASIC5.43□□□□□ -1.54
CLIP1P30622 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 AC015802.5-201ENST00000607478 399 ntBASIC5.43□□□□□ -1.54
CLIP1P30622 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP1P30622 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP1P30622 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP1P30622 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP1P30622 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP1P30622 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP1P30622 Y_RNA.111-201ENST00000363248 100 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP1P30622 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP1P30622 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP1P30622 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP1P30622 RPL6P9-201ENST00000466502 859 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 RPL7P38-201ENST00000488396 739 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP1P30622 PHBP14-201ENST00000512887 367 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 NARSP2-201ENST00000518524 679 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP1P30622 AL390334.1-201ENST00000556395 450 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 AC018690.1-201ENST00000608144 626 ntBASIC5.42□□□□□ -1.54
CLIP1P30622 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP1P30622 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP1P30622 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLIP1P30622 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP1P30622 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP1P30622 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP1P30622 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP1P30622 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP1P30622 UBE2V1P1-201ENST00000430836 445 ntBASIC5.41□□□□□ -1.54
CLIP1P30622 AC091862.1-201ENST00000438016 1100 ntBASIC5.41□□□□□ -1.54
CLIP1P30622 MTND6P6-201ENST00000478031 263 ntBASIC5.41□□□□□ -1.54
CLIP1P30622 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP1P30622 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP1P30622 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP1P30622 AL513477.2-201ENST00000607858 568 ntBASIC5.41□□□□□ -1.54
CLIP1P30622 AC006504.1-201ENST00000562493 3666 ntBASIC5.41□□□□□ -1.54
CLIP1P30622 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
CLIP1P30622 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms