Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC106806.2-201ENST00000509365 500 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN6P29350 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 PSMB7P1-201ENST00000556349 514 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 ATP5F1P7-201ENST00000567330 760 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC112503.1-201ENST00000608436 391 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC005962.2-201ENST00000611427 652 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN6P29350 FRG1HP-204ENST00000617940 757 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC233309.1-201ENST00000619522 751 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC095038.2-201ENST00000621464 1070 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN6P29350 MIR4496-201ENST00000635896 61 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 MIR6830-201ENST00000636015 70 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC132825.7-201ENST00000638744 335 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN6P29350 XPOTP1-201ENST00000443317 2398 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN6P29350 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PTPN6P29350 MFSD8-213ENST00000641134 1327 ntBASIC3.96□□□□□ -1.77
PTPN6P29350 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PTPN6P29350 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN6P29350 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN6P29350 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTPN6P29350 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 SNORD56.4-201ENST00000363883 71 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 RN7SKP235-201ENST00000410662 305 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 NRBF2P2-201ENST00000413087 861 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 MFSD13B-201ENST00000420133 1290 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN6P29350 AC011742.1-201ENST00000431448 434 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 USP9YP7-201ENST00000436723 430 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN6P29350 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN6P29350 AL451050.1-201ENST00000450126 415 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 USP9YP32-201ENST00000452432 430 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN6P29350 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPN6P29350 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN6P29350 RPS6P4-201ENST00000494693 758 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AC104108.1-201ENST00000509930 412 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AC139103.1-201ENST00000534696 1030 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN6P29350 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN6P29350 AC093510.2-201ENST00000562820 896 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 AC023575.1-201ENST00000580510 358 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 MIR3138-201ENST00000585238 82 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN6P29350 VN1R79P-201ENST00000593540 513 ntBASIC3.96□□□□□ -1.78
PTPN6P29350 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN6P29350 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN6P29350 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN6P29350 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN6P29350 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN6P29350 AC104446.1-201ENST00000613728 1321 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN6P29350 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PTPN6P29350 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN6P29350 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 RNA5SP366-201ENST00000365454 123 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN6P29350 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 OR6C69P-201ENST00000394268 893 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 JKAMPP1-201ENST00000413804 919 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 NUP35P2-201ENST00000416748 943 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 AC234779.1-201ENST00000425910 285 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 RSL24D1P6-201ENST00000426934 401 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 MTCO1P54-201ENST00000430139 712 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC092809.1-201ENST00000441469 474 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 HMGB1P48-201ENST00000446155 598 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN6P29350 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AP000873.1-201ENST00000463987 400 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN6P29350 CYCSP20-201ENST00000473154 315 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC104689.1-201ENST00000473356 768 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC103987.1-201ENST00000473394 348 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 RPL21P47-201ENST00000483696 477 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN6P29350 AC092045.1-201ENST00000495716 1231 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC020593.1-201ENST00000507399 299 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN6P29350 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
PTPN6P29350 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 IGKV2-38-201ENST00000517443 247 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 IGHV3-32-201ENST00000519182 355 ntBASIC3.95□□□□□ -1.78
PTPN6P29350 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN6P29350 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.95□□□□□ -1.78
PTPN6P29350 AC090281.1-201ENST00000523019 276 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms