Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC138915.3-201ENST00000562908 1389 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RARSP1-201ENST00000542842 1418 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DMAP28067 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DMAP28067 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 IGKV7-3-201ENST00000357453 298 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 HMGB3P19-201ENST00000403971 560 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL590290.1-201ENST00000405336 380 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 MTHFD2P2-201ENST00000407725 247 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DMAP28067 OSTCP5-201ENST00000425293 453 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL360081.1-201ENST00000428299 555 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 VN1R54P-201ENST00000435210 1049 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 RANP8-201ENST00000444720 713 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 IGBP1P5-201ENST00000507524 1000 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC106806.2-201ENST00000509365 500 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 OR8L1P-201ENST00000534005 955 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC006518.1-201ENST00000541449 943 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 EIF1AXP2-201ENST00000555940 413 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AL845331.3-202ENST00000562856 261 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 MIR4436B2-201ENST00000581415 91 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 MIR4436B1-201ENST00000583272 91 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 FAM25E-202ENST00000608562 189 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 SDR42E1P1-201ENST00000611327 477 ntBASIC3.32□□□□□ -1.88
HLA-DMAP28067 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DMAP28067 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HLA-DMAP28067 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DMAP28067 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DMAP28067 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DMAP28067 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DMAP28067 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DMAP28067 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC026951.1-201ENST00000559530 2459 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 RNU6-31P-201ENST00000384388 108 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 MIR129-1-201ENST00000384972 72 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AL035696.2-201ENST00000407941 709 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 RNU4-25P-201ENST00000410569 230 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 RPL38P1-201ENST00000460914 211 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 HMGN1P8-201ENST00000463578 288 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 MTND3P6-201ENST00000485242 339 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC105233.1-201ENST00000498840 781 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC021146.5-201ENST00000503544 545 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DMAP28067 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC099522.1-202ENST00000514718 367 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC113194.1-201ENST00000606037 500 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC135803.1-201ENST00000608748 565 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 MIR6864-201ENST00000617935 70 ntBASIC3.31□□□□□ -1.88
HLA-DMAP28067 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DMAP28067 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DMAP28067 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DMAP28067 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC024560.2-201ENST00000507981 1497 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AL049737.1-201ENST00000413920 1403 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC007342.9-201ENST00000623877 1385 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms