Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNA5SP519-201ENST00000516480 119 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AC134698.5-201ENST00000519444 336 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 IFITM8P-201ENST00000522529 394 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN3P26045 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN3P26045 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN3P26045 OR8I1P-201ENST00000529291 931 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN3P26045 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN3P26045 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN3P26045 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PTPN3P26045 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN3P26045 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN3P26045 AL022067.1-201ENST00000602426 454 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AC091488.1-201ENST00000604239 660 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AL356218.2-201ENST00000605264 187 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN3P26045 AC064801.1-201ENST00000612025 407 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AC099669.2-201ENST00000616549 437 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AC084824.4-201ENST00000620106 731 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 AC139713.2-210ENST00000641741 992 ntBASIC4.33□□□□□ -1.72
PTPN3P26045 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN3P26045 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN3P26045 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PTPN3P26045 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PTPN3P26045 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN3P26045 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 RNU1-94P-201ENST00000362627 173 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 SNORA72.3-201ENST00000365074 132 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 RPS24P12-201ENST00000402084 394 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 RPL7P27-201ENST00000403775 720 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 MIR1179-201ENST00000408703 91 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC106883.1-201ENST00000418805 562 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 CBX1P1-201ENST00000440184 427 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 AL592437.1-201ENST00000443781 492 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 MTND1P33-201ENST00000446251 917 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC006463.2-201ENST00000473326 348 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 RPL35P6-201ENST00000490024 372 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 TRAV31-201ENST00000502780 342 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 PRELID3BP6-201ENST00000503839 571 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 RNA5SP49-201ENST00000516450 115 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN3P26045 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 AC006518.2-201ENST00000542513 940 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 AP001180.3-201ENST00000582221 145 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN3P26045 AC096947.1-201ENST00000603233 470 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AP003117.2-201ENST00000606010 545 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AC013468.1-201ENST00000608680 598 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AL359535.1-201ENST00000612100 1087 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 FAM27D1-201ENST00000612308 341 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AL023881.1-201ENST00000621088 301 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 AL109659.3-201ENST00000624985 950 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN3P26045 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTPN3P26045 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
PTPN3P26045 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN3P26045 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN3P26045 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN3P26045 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN3P26045 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN3P26045 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PTPN3P26045 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN3P26045 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN3P26045 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN3P26045 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN3P26045 RNA5SP52-201ENST00000362448 134 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 RNA5SP509-201ENST00000364577 119 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 ATP5F1P2-201ENST00000398143 760 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 AC092638.1-201ENST00000411966 1275 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 AC004987.3-201ENST00000413879 771 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 P2RY10P2-201ENST00000416730 913 ntBASIC4.31□□□□□ -1.72
PTPN3P26045 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms