Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL1A1P02452 AC004944.1-201ENST00000517807 3059 ntBASIC4.21□□□□□ -1.73
COL1A1P02452 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL1A1P02452 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
COL1A1P02452 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL1A1P02452 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL1A1P02452 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL1A1P02452 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
COL1A1P02452 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL1A1P02452 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 BX842559.1-201ENST00000419615 532 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 OR6C64P-201ENST00000419708 825 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.21□□□□□ -1.74
COL1A1P02452 UBE2V1P1-201ENST00000430836 445 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 AC006994.1-201ENST00000438212 839 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 Z75741.1-201ENST00000446793 314 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 RN7SL93P-201ENST00000463035 293 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 AP001486.1-201ENST00000463339 476 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.21□□□□□ -1.74
COL1A1P02452 IGKV2-26-201ENST00000518305 343 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.21□□□□□ -1.74
COL1A1P02452 AC116312.1-201ENST00000606841 314 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 AL732372.2-225ENST00000642124 456 ntBASIC4.21□□□□□ -1.74
COL1A1P02452 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL1A1P02452 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL1A1P02452 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.74
COL1A1P02452 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.2□□□□□ -1.74
COL1A1P02452 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL1A1P02452 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL1A1P02452 MTND4P22-201ENST00000413116 1169 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 OR1AA1P-201ENST00000419597 916 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 RPS26P47-201ENST00000427219 348 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 RPL37P3-201ENST00000456825 293 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.2□□□□□ -1.74
COL1A1P02452 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.2□□□□□ -1.74
COL1A1P02452 PHBP14-201ENST00000512887 367 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 AL121766.1-201ENST00000547436 487 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.2□□□□□ -1.74
COL1A1P02452 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.2□□□□□ -1.74
COL1A1P02452 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL1A1P02452 NCAPGP1-201ENST00000505112 1814 ntBASIC4.2□□□□□ -1.74
COL1A1P02452 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL1A1P02452 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL1A1P02452 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
COL1A1P02452 TAF9BP1-201ENST00000396646 746 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.19□□□□□ -1.74
COL1A1P02452 GOLGA5P1-201ENST00000507317 980 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.19□□□□□ -1.74
COL1A1P02452 AP005205.1-201ENST00000563503 508 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.19□□□□□ -1.74
COL1A1P02452 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.19□□□□□ -1.74
COL1A1P02452 HMGB1P50-201ENST00000605814 607 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 AC135507.2-201ENST00000612443 309 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL1A1P02452 MTCO1P7-201ENST00000419523 1542 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.19□□□□□ -1.74
COL1A1P02452 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
COL1A1P02452 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL1A1P02452 AC063923.1-201ENST00000478982 1619 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AC019072.1-201ENST00000604535 1551 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.18□□□□□ -1.74
COL1A1P02452 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL1A1P02452 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 RNA5SP432-201ENST00000362480 116 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 ZNF603P-201ENST00000405613 487 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 MIR1289-1-201ENST00000408836 144 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 NPM1P48-201ENST00000436002 853 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 HMGB1P16-201ENST00000447155 540 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.18□□□□□ -1.74
COL1A1P02452 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.18□□□□□ -1.74
COL1A1P02452 RPS4XP2-201ENST00000458402 793 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.18□□□□□ -1.74
COL1A1P02452 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.18□□□□□ -1.74
COL1A1P02452 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.18□□□□□ -1.74
COL1A1P02452 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.18□□□□□ -1.74
COL1A1P02452 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.18□□□□□ -1.74
COL1A1P02452 MIR5680-201ENST00000577577 84 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 AC116158.1-201ENST00000560231 2129 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.18□□□□□ -1.74
COL1A1P02452 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL1A1P02452 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 GNG5P1-201ENST00000255500 204 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AL603766.1-201ENST00000407763 664 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms