Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.13□□□□□ -1.75
CLPTM1O96005 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 ENSAP3-201ENST00000312710 333 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.13□□□□□ -1.75
CLPTM1O96005 RNU6-98P-201ENST00000384173 107 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 MIR585-201ENST00000384887 94 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 MIR513B-201ENST00000385136 84 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 RPL31P52-201ENST00000407532 367 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AC114755.2-201ENST00000413520 361 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 RPL7P53-201ENST00000421245 739 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 RPL7P29-201ENST00000437151 728 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC092170.1-201ENST00000440211 356 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AL935212.3-201ENST00000450729 284 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 VN1R32P-201ENST00000452234 905 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 RNU7-140P-201ENST00000459546 60 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC104687.1-201ENST00000485829 412 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AC109458.1-201ENST00000508858 316 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 FTH1P9-201ENST00000513251 355 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 RN7SKP276-201ENST00000516242 268 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 MTND2P38-201ENST00000522536 667 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 HMGB1P1-201ENST00000522557 636 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 DUXAP5-201ENST00000529668 529 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.13□□□□□ -1.75
CLPTM1O96005 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.13□□□□□ -1.75
CLPTM1O96005 UBE2FP2-201ENST00000566646 462 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.13□□□□□ -1.75
CLPTM1O96005 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC022884.3-201ENST00000579571 248 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC245036.5-201ENST00000596330 847 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC090181.2-201ENST00000602975 672 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC116651.1-201ENST00000609724 556 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 AC004908.3-201ENST00000610248 625 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.13□□□□□ -1.75
CLPTM1O96005 AL121594.5-201ENST00000631724 573 ntBASIC4.13□□□□□ -1.75
CLPTM1O96005 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.13□□□□□ -1.75
CLPTM1O96005 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.13□□□□□ -1.75
CLPTM1O96005 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLPTM1O96005 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 AC106871.1-201ENST00000568324 3102 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC135352.1-201ENST00000506173 1418 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 SDAD1P1-202ENST00000524156 2051 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RNU6-236P-201ENST00000363886 106 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 RNA5SP87-201ENST00000384155 118 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RSU1P3-201ENST00000412878 835 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 TCEA1P4-201ENST00000415066 844 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.12□□□□□ -1.75
CLPTM1O96005 MTND2P16-201ENST00000419987 799 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AL645608.4-201ENST00000423619 154 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.12□□□□□ -1.75
CLPTM1O96005 NRBF2P3-201ENST00000432731 865 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 RPS26P30-201ENST00000443431 335 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AL050341.1-201ENST00000447743 313 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RPL5P32-201ENST00000454085 879 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RNU7-27P-201ENST00000459281 62 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC011037.1-201ENST00000483964 558 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC079203.1-201ENST00000487972 404 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.12□□□□□ -1.75
CLPTM1O96005 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 AC119751.1-201ENST00000513357 765 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms