Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR506-201ENST00000384998 124 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 MIR298-201ENST00000401212 88 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AL133270.1-201ENST00000402635 279 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 VDAC1P9-201ENST00000412766 841 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC004448.2-201ENST00000422360 586 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 OR4F13P-201ENST00000428478 931 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 BRWD1P3-201ENST00000428816 390 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 RPL21P91-201ENST00000429231 479 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 RPL31P54-201ENST00000429803 370 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 AL359265.2-201ENST00000434367 631 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AL133477.1-201ENST00000457472 514 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 RN7SL610P-201ENST00000463845 291 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 RNA5SP446-201ENST00000515955 82 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 DUXAP5-201ENST00000529668 529 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 SULT1C2P1-202ENST00000562418 459 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 OR4K7P-201ENST00000580232 945 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 SNORD39.3-201ENST00000584451 71 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 HSPE1P14-201ENST00000605812 302 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC231759.1-201ENST00000616455 597 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AC009704.2-201ENST00000618739 483 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 MIR1322-201ENST00000638013 71 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 FAM157B-203ENST00000639350 358 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 MAPK10-303ENST00000641324 3959 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-2O95096 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 SNORA71.2-201ENST00000364941 134 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC019155.1-201ENST00000382242 574 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 MIR649-201ENST00000384843 97 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 SNORD96B-201ENST00000386148 79 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NKX2-2O95096 SDHCP2-201ENST00000398565 501 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 ZNF603P-201ENST00000405613 487 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC012519.1-201ENST00000424588 610 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC096632.1-201ENST00000427395 310 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 USP9YP9-201ENST00000429406 715 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 ATP5F1P1-201ENST00000433775 569 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 EXTL2P1-201ENST00000446218 416 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC004263.1-201ENST00000479327 332 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC005726.1-201ENST00000494679 427 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC109445.1-201ENST00000512356 383 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AL354943.1-201ENST00000572103 781 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-2O95096 RN7SL690P-201ENST00000582087 240 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 MIR4480-201ENST00000582492 71 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms