Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.69□□□□□ -1.82
SEMA3DO95025 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.69□□□□□ -1.82
SEMA3DO95025 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.69□□□□□ -1.82
SEMA3DO95025 AC067852.4-201ENST00000590314 478 ntBASIC3.69□□□□□ -1.82
SEMA3DO95025 AL590392.1-201ENST00000604960 446 ntBASIC3.69□□□□□ -1.82
SEMA3DO95025 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SEMA3DO95025 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.69□□□□□ -1.82
SEMA3DO95025 MIR6500-201ENST00000622700 86 ntBASIC3.69□□□□□ -1.82
SEMA3DO95025 AC019080.5-201ENST00000624891 757 ntBASIC3.69□□□□□ -1.82
SEMA3DO95025 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.69□□□□□ -1.82
SEMA3DO95025 AF001550.2-201ENST00000636643 217 ntBASIC3.69□□□□□ -1.82
SEMA3DO95025 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SEMA3DO95025 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SEMA3DO95025 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SEMA3DO95025 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
SEMA3DO95025 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SEMA3DO95025 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC119744.1-201ENST00000454746 1715 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 RNU6-819P-201ENST00000364116 107 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 COX6CP17-201ENST00000421389 185 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 AL356806.1-201ENST00000422524 916 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AL138799.3-201ENST00000438968 350 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
SEMA3DO95025 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC108064.1-201ENST00000513791 460 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 RNU6-1231P-201ENST00000517185 103 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 MIR2116-201ENST00000517221 80 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.68□□□□□ -1.82
SEMA3DO95025 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AL137849.1-201ENST00000604767 169 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 AC005021.1-201ENST00000608730 355 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
SEMA3DO95025 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SEMA3DO95025 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.68□□□□□ -1.82
SEMA3DO95025 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 RN7SKP222-201ENST00000410651 315 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 RNU2-37P-201ENST00000410695 177 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AL691447.1-201ENST00000419456 387 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.67□□□□□ -1.82
SEMA3DO95025 AL606490.8-201ENST00000441624 319 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AC006326.1-201ENST00000445465 787 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 CYCSP53-201ENST00000455540 265 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AC005229.2-201ENST00000456995 399 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SEMA3DO95025 AC004069.2-201ENST00000505438 1114 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AC005798.1-201ENST00000513715 387 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.67□□□□□ -1.82
SEMA3DO95025 AC034244.2-201ENST00000514668 858 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 SNORA70.17-201ENST00000516449 133 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 SUMO2P20-201ENST00000520803 283 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 OR4V1P-201ENST00000525394 1140 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AC092747.2-201ENST00000545069 983 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 AC120057.2-201ENST00000571520 271 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.67□□□□□ -1.82
SEMA3DO95025 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SEMA3DO95025 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 LINC00561-201ENST00000565815 2738 ntBASIC3.67□□□□□ -1.82
SEMA3DO95025 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEMA3DO95025 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SEMA3DO95025 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SEMA3DO95025 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.66□□□□□ -1.82
SEMA3DO95025 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SEMA3DO95025 MIR421-201ENST00000365696 85 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEMA3DO95025 RNU6-213P-201ENST00000384051 104 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 PRELID3BP11-201ENST00000414230 479 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 RPL31P45-201ENST00000419532 356 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms