Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
CLDN11O75508 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN11O75508 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN11O75508 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN11O75508 AL592437.2-201ENST00000421655 2434 ntBASIC3.81□□□□□ -1.8
CLDN11O75508 AC012020.1-201ENST00000624541 1728 ntBASIC3.81□□□□□ -1.8
CLDN11O75508 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN11O75508 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CLDN11O75508 AC017002.4-201ENST00000604721 1525 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 AL118496.1-201ENST00000440201 1812 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CLDN11O75508 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN11O75508 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CLDN11O75508 RN7SKP27-201ENST00000410684 333 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 MTND2P11-201ENST00000423638 648 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 USP12PY-201ENST00000427677 1064 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN11O75508 AC239367.2-201ENST00000447309 705 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AC133473.1-201ENST00000455173 299 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN11O75508 RPL7P48-201ENST00000461513 746 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 SYT14P1-201ENST00000481459 721 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN11O75508 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN11O75508 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 RNU6-1004P-201ENST00000516584 111 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 SNORA67.7-201ENST00000516664 135 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN11O75508 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN11O75508 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 MIR3158-1-201ENST00000583596 81 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN11O75508 AC123768.4-201ENST00000616244 701 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 AC012442.3-202ENST00000636742 206 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 ZNF285B-201ENST00000561698 1767 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN11O75508 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN11O75508 AC093311.1-201ENST00000506586 2021 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN11O75508 MTCO1P8-201ENST00000416914 1523 ntBASIC3.8□□□□□ -1.8
CLDN11O75508 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 AC074029.4-201ENST00000624796 1859 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN11O75508 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN11O75508 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN11O75508 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLDN11O75508 SNORD3H-201ENST00000384486 214 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 RPL7P60-201ENST00000397636 735 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN11O75508 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN11O75508 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN11O75508 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 RPS3AP46-201ENST00000448352 682 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN11O75508 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN11O75508 HMGB1P23-201ENST00000518743 568 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN11O75508 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN11O75508 AC092747.2-201ENST00000545069 983 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN11O75508 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN11O75508 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN11O75508 BRDTP1-201ENST00000605735 677 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC243654.2-201ENST00000612843 443 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 AC018555.1-201ENST00000567548 1980 ntBASIC3.79□□□□□ -1.8
CLDN11O75508 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN11O75508 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN11O75508 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN11O75508 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN11O75508 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN11O75508 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLDN11O75508 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN11O75508 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN11O75508 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN11O75508 AL122126.1-201ENST00000546905 1318 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 RNU1-85P-201ENST00000364127 164 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 MIR200C-201ENST00000384980 68 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 RPL31P52-201ENST00000407532 367 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 SNORA11-201ENST00000408789 128 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 ATP5A1P2-201ENST00000412323 255 ntBASIC3.78□□□□□ -1.8
CLDN11O75508 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms