Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 MTND5P13-201ENST00000513046 1079 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RNU5A-4P-201ENST00000516588 111 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.61□□□□□ -1.67
SMAD6O43541 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.61□□□□□ -1.67
SMAD6O43541 AC006518.2-201ENST00000542513 940 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 MIR4277-201ENST00000578298 84 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 AC233280.2-201ENST00000603917 1070 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 DPRXP5-201ENST00000604662 539 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC064872.1-201ENST00000604823 1072 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC124312.4-201ENST00000605533 310 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC012409.3-201ENST00000611343 981 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AL138478.1-201ENST00000612252 832 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 RMST_5.1-201ENST00000618704 126 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AL158163.2-201ENST00000619110 700 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 MIR6810-201ENST00000622701 70 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC007490.1-201ENST00000624321 703 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC090582.1-201ENST00000636321 199 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 AC139713.2-210ENST00000641741 992 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.61□□□□□ -1.67
SMAD6O43541 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
SMAD6O43541 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.6□□□□□ -1.67
SMAD6O43541 OR56B2P-201ENST00000317102 954 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 RNU4-75P-201ENST00000364621 146 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 RNU6-224P-201ENST00000384055 107 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 MCTS2P-201ENST00000394552 546 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AL021407.1-201ENST00000404531 386 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC048351.1-201ENST00000420064 602 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 RPL18P10-201ENST00000425606 538 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 MTCYBP39-201ENST00000437562 491 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.6□□□□□ -1.67
SMAD6O43541 RPL23AP43-201ENST00000446445 471 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 NPM1P49-201ENST00000448027 714 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 RNU7-125P-201ENST00000458760 62 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC108734.3-201ENST00000481241 1165 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AC108471.1-201ENST00000513977 287 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 MTND1P5-201ENST00000517906 940 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.6□□□□□ -1.67
SMAD6O43541 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 MTND4LP24-201ENST00000572277 291 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC015688.2-201ENST00000584523 262 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL020997.3-201ENST00000602843 359 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 PSMA6P4-201ENST00000603247 718 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 AP004372.1-201ENST00000604842 844 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 SNORD91B-202ENST00000608459 222 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC020634.1-201ENST00000608701 549 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AP000255.1-201ENST00000610276 676 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AL450489.1-201ENST00000612071 468 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.6□□□□□ -1.67
SMAD6O43541 AL354976.1-201ENST00000613843 387 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AP005019.3-201ENST00000620418 560 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SMAD6O43541 MIR6715B-201ENST00000637172 77 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 AC025263.3-201ENST00000622965 1396 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SMAD6O43541 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMAD6O43541 A2MP1-204ENST00000566278 4130 ntBASIC4.6□□□□□ -1.67
SMAD6O43541 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SMAD6O43541 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
SMAD6O43541 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
SMAD6O43541 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.59□□□□□ -1.67
SMAD6O43541 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms