Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SOX1O00570 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SOX1O00570 SNORA48.7-201ENST00000391302 135 ntBASIC6.14□□□□□ -1.43
SOX1O00570 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 AC127391.1-201ENST00000411737 98 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 SNRPFP1-201ENST00000414761 252 ntBASIC6.14□□□□□ -1.43
SOX1O00570 MRPL50P2-201ENST00000416821 482 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 MTCO2P5-201ENST00000422621 426 ntBASIC6.14□□□□□ -1.43
SOX1O00570 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.14□□□□□ -1.43
SOX1O00570 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SOX1O00570 TDGF1P1-201ENST00000445734 527 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 AC063943.1-201ENST00000465434 453 ntBASIC6.14□□□□□ -1.43
SOX1O00570 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.14□□□□□ -1.43
SOX1O00570 SNORA70.11-201ENST00000515987 138 ntBASIC6.14□□□□□ -1.43
SOX1O00570 SNORA70.13-201ENST00000516116 138 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 AP003181.2-201ENST00000528941 181 ntBASIC6.14□□□□□ -1.43
SOX1O00570 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SOX1O00570 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX1O00570 AC034105.3-201ENST00000565294 442 ntBASIC6.14□□□□□ -1.43
SOX1O00570 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 MIR5186-201ENST00000577504 120 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC119403.2-201ENST00000590960 598 ntBASIC6.14□□□□□ -1.43
SOX1O00570 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 AL161616.1-201ENST00000611867 286 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AL133173.2-201ENST00000614270 90 ntBASIC6.14□□□□□ -1.43
SOX1O00570 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX1O00570 AL118522.2-201ENST00000616045 615 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC024940.5-201ENST00000622889 474 ntBASIC6.14□□□□□ -1.43
SOX1O00570 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX1O00570 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX1O00570 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX1O00570 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.13□□□□□ -1.43
SOX1O00570 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX1O00570 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX1O00570 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SOX1O00570 RNU6-738P-201ENST00000384531 106 ntBASIC6.13□□□□□ -1.43
SOX1O00570 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 RPS20P2-201ENST00000402520 389 ntBASIC6.13□□□□□ -1.43
SOX1O00570 MRPL42P2-201ENST00000403169 426 ntBASIC6.13□□□□□ -1.43
SOX1O00570 RPL12P9-201ENST00000412942 488 ntBASIC6.13□□□□□ -1.43
SOX1O00570 UBE2V1P14-201ENST00000415815 558 ntBASIC6.13□□□□□ -1.43
SOX1O00570 MTATP6P18-201ENST00000417994 673 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AC073069.1-201ENST00000428657 441 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX1O00570 HMGB3P10-201ENST00000434734 572 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AC023274.2-201ENST00000445264 521 ntBASIC6.13□□□□□ -1.43
SOX1O00570 RPL7P12-201ENST00000446719 750 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AC026427.2-201ENST00000506228 536 ntBASIC6.13□□□□□ -1.43
SOX1O00570 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 RNU6-277P-201ENST00000516272 106 ntBASIC6.13□□□□□ -1.43
SOX1O00570 Vault.3-201ENST00000516676 95 ntBASIC6.13□□□□□ -1.43
SOX1O00570 RNU6-835P-201ENST00000516974 104 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX1O00570 AL352979.3-201ENST00000553515 247 ntBASIC6.13□□□□□ -1.43
SOX1O00570 AL109766.1-201ENST00000555080 552 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms