Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL713998.2-201ENST00000604538 1198 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC022149.2-201ENST00000621061 203 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AL357559.1-201ENST00000622228 274 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AL732618.1-201ENST00000623251 301 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 MIR7153-201ENST00000637758 57 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AL592437.2-201ENST00000421655 2434 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC006042.3-201ENST00000454684 1469 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
SDCBPO00560 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.02□□□□□ -1.93
SDCBPO00560 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 AP002088.1-201ENST00000382740 395 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SDCBPO00560 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 HMGB3P18-201ENST00000406327 590 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 RNU6-55P-201ENST00000411092 107 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 RNU6-954P-201ENST00000411355 107 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 TCEA1P4-201ENST00000415066 844 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 HMGB3P5-201ENST00000428894 612 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 AL133162.1-201ENST00000463228 453 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 RPS20P21-201ENST00000466859 343 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC020893.1-201ENST00000502452 580 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 AP006245.1-201ENST00000522549 120 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 NPM1P35-201ENST00000533043 868 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 HSPE1P5-201ENST00000561489 272 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.01□□□□□ -1.93
SDCBPO00560 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.01□□□□□ -1.93
SDCBPO00560 AC011492.1-201ENST00000600023 315 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AC067959.1-201ENST00000604334 379 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 AP003400.2-201ENST00000624036 666 ntBASIC3.01□□□□□ -1.93
SDCBPO00560 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.01□□□□□ -1.93
SDCBPO00560 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDCBPO00560 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3□□□□□ -1.93
SDCBPO00560 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 PHKBP1-201ENST00000450951 1951 ntBASIC3□□□□□ -1.93
SDCBPO00560 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3□□□□□ -1.93
SDCBPO00560 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 AC009237.5-201ENST00000414271 501 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC068533.1-201ENST00000418542 415 ntBASIC3□□□□□ -1.93
SDCBPO00560 OSTCP5-201ENST00000425293 453 ntBASIC3□□□□□ -1.93
SDCBPO00560 RPL23AP4-201ENST00000427757 463 ntBASIC3□□□□□ -1.93
SDCBPO00560 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 OR4F13P-201ENST00000428478 931 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 RPL7P48-201ENST00000461513 746 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC010401.1-201ENST00000463867 348 ntBASIC3□□□□□ -1.93
SDCBPO00560 METTL15P1-201ENST00000481421 1045 ntBASIC3□□□□□ -1.93
SDCBPO00560 RPL7P47-201ENST00000497299 556 ntBASIC3□□□□□ -1.93
SDCBPO00560 HMGN1P11-201ENST00000508668 303 ntBASIC3□□□□□ -1.93
SDCBPO00560 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3□□□□□ -1.93
SDCBPO00560 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 RNU2-27P-201ENST00000516185 142 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3□□□□□ -1.93
SDCBPO00560 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3□□□□□ -1.93
SDCBPO00560 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3□□□□□ -1.93
SDCBPO00560 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3□□□□□ -1.93
SDCBPO00560 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3□□□□□ -1.93
SDCBPO00560 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 MIR4697-201ENST00000582977 78 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC107982.3-201ENST00000584957 985 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC099676.1-201ENST00000608886 657 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC099669.2-201ENST00000616549 437 ntBASIC3□□□□□ -1.93
SDCBPO00560 AC068724.3-201ENST00000625906 87 ntBASIC3□□□□□ -1.93
SDCBPO00560 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms