Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 RNU6-492P-201ENST00000363035 104 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 RNU6-707P-201ENST00000364647 95 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 RNU1-63P-201ENST00000383902 164 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 SNORD116-12-201ENST00000384468 92 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 MIR217-201ENST00000384817 110 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 MIR153-1-201ENST00000384914 90 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 MIR659-201ENST00000384963 97 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 ENSAP1-201ENST00000392855 326 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 ANAPC10P1-201ENST00000395991 556 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL136310.1-201ENST00000404926 654 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 OR4K6P-201ENST00000416478 897 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC007435.1-201ENST00000421086 415 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 OR4F13P-201ENST00000428478 931 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 RPL36P19-201ENST00000430744 301 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 RPL12P3-201ENST00000440080 396 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 RPL23AP93-201ENST00000440847 484 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC073648.4-201ENST00000442655 781 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL589880.1-201ENST00000448271 287 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC009963.2-201ENST00000453431 138 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC010301.1-201ENST00000473936 355 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 RN7SL41P-201ENST00000476144 297 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 IGLV2-34-201ENST00000490007 283 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC105233.1-201ENST00000498840 781 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC010460.2-201ENST00000509054 677 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 RNU6-885P-201ENST00000516607 104 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC090151.1-201ENST00000520784 730 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 BPIFA4P-203ENST00000603168 689 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AL035411.2-201ENST00000604022 421 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC010201.1-201ENST00000605051 540 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC006927.4-201ENST00000639187 543 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 CPHL1P-201ENST00000461341 3407 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 OR14L1P-202ENST00000641545 3009 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 MAPK10-286ENST00000641208 8747 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 MTCO1P24-201ENST00000515438 1558 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 MAPK10-263ENST00000641052 4307 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 OR51H2P-202ENST00000641424 3046 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 RNU6-251P-201ENST00000363235 104 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 SUGT1P1-201ENST00000379514 476 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 RNA5SP87-201ENST00000384155 118 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 MIR298-201ENST00000401212 88 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 AL049697.2-201ENST00000403708 294 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 RAC1P8-201ENST00000427086 527 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 HIGD1AP12-201ENST00000427832 281 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 RPL23AP25-201ENST00000430973 463 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 RPL23AP43-201ENST00000446445 471 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC012671.1-201ENST00000451912 203 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC087385.1-201ENST00000475062 312 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 RPL12P20-201ENST00000475538 479 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 RPL32P9-201ENST00000487963 407 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 NDUFB4P12-201ENST00000513465 390 ntBASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.62□□□□□ -1.83
SRRM4A7MD48 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms