Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC139495.1-202ENST00000513164 354 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC139103.1-201ENST00000534696 1030 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 OR8R1P-201ENST00000543943 764 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF6Q9Y252 AC100871.1-201ENST00000507871 1456 ntBASIC3.91□□□□□ -1.78
RNF6Q9Y252 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF6Q9Y252 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF6Q9Y252 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF6Q9Y252 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF6Q9Y252 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF6Q9Y252 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF6Q9Y252 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF6Q9Y252 AC024341.1-201ENST00000526444 1552 ntBASIC3.9□□□□□ -1.78
RNF6Q9Y252 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF6Q9Y252 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF6Q9Y252 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF6Q9Y252 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF6Q9Y252 RNU6-984P-201ENST00000363236 109 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 RNA5SP322-201ENST00000363617 119 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 RNU1-85P-201ENST00000364127 164 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 RPL32P23-201ENST00000397237 405 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 HNRNPDP2-201ENST00000406475 478 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 NRBF2P2-201ENST00000413087 861 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AL139095.3-201ENST00000419672 1203 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AL132765.1-201ENST00000434165 553 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AF228730.2-201ENST00000438784 848 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 RPL23AP52-201ENST00000439311 478 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 RPL35P6-201ENST00000490024 372 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC109458.1-201ENST00000508858 316 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC008565.1-201ENST00000509046 885 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 C1DP5-201ENST00000525775 383 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 MED28P5-201ENST00000528254 438 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 OR5BC1P-201ENST00000529327 739 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 TVP23BP1-201ENST00000557500 617 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC034105.4-201ENST00000568304 277 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AGGF1P6-201ENST00000569213 976 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 BNIP3P33-201ENST00000598912 569 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC092474.3-201ENST00000603022 568 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AC025946.2-201ENST00000603398 234 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 AL139286.1-201ENST00000604465 483 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AL163051.2-201ENST00000618976 735 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 MIR6715B-201ENST00000637172 77 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF6Q9Y252 AL627171.1-201ENST00000618845 1308 ntBASIC3.9□□□□□ -1.79
RNF6Q9Y252 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF6Q9Y252 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF6Q9Y252 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF6Q9Y252 RN7SKP280-201ENST00000364196 304 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AL161909.1-201ENST00000397390 712 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 PTGES3P2-201ENST00000407942 482 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 RNU4-27P-201ENST00000410889 139 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 RNU2-72P-201ENST00000411175 163 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 RNU2-6P-201ENST00000411404 190 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 HMGB3P31-201ENST00000413333 595 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AC004022.2-201ENST00000413824 193 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AL158825.1-201ENST00000414735 521 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF6Q9Y252 RPL36AP36-201ENST00000418616 301 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF6Q9Y252 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF6Q9Y252 AC068135.1-201ENST00000446164 246 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AL035407.2-201ENST00000454090 378 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF6Q9Y252 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF6Q9Y252 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF6Q9Y252 AC098799.1-201ENST00000504752 800 ntBASIC3.89□□□□□ -1.79
RNF6Q9Y252 AL592156.1-201ENST00000508758 304 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms