Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 HSFY4P-201ENST00000415994 1181 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 RANP7-201ENST00000418085 644 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC007967.1-201ENST00000455422 1159 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 RNU7-157P-201ENST00000459600 66 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC104849.1-201ENST00000462623 405 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC025518.1-201ENST00000479856 347 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC106872.2-201ENST00000494303 480 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC005798.1-201ENST00000513715 387 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC010342.1-201ENST00000514047 877 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 MTCYBP19-201ENST00000517463 1124 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AP006245.1-201ENST00000522549 120 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC005412.1-201ENST00000580812 1049 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 HSPA8P1-201ENST00000425843 1833 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 Y_RNA.333-201ENST00000365274 102 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 RN7SKP53-201ENST00000411337 315 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 RHEBP3-201ENST00000411920 351 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC005229.2-201ENST00000456995 399 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 BNIP3P33-201ENST00000598912 569 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC092111.2-201ENST00000611627 1414 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 RN7SKP177-201ENST00000410567 355 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 CYP4F29P-201ENST00000420685 446 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 MOB1AP1-201ENST00000430903 535 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 SKP1P1-201ENST00000438081 489 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC115115.1-201ENST00000449927 248 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 SETP14-201ENST00000497538 873 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
CCDC88CQ9P219 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC88CQ9P219 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC88CQ9P219 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC88CQ9P219 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC88CQ9P219 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CCDC88CQ9P219 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 MIR423-201ENST00000362201 94 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 RPS7P15-201ENST00000415804 584 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 BX510359.1-201ENST00000456973 237 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 AC012468.1-201ENST00000604888 430 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
CCDC88CQ9P219 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC88CQ9P219 SNORD17-201ENST00000390930 237 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 MTHFD2P2-201ENST00000407725 247 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AL035423.1-201ENST00000420331 213 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms