Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC105233.3-201ENST00000531125 744 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.23□□□□□ -1.73
HACD3Q9P035 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC025260.1-201ENST00000548858 430 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC023825.1-201ENST00000566704 1030 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.23□□□□□ -1.73
HACD3Q9P035 ZNF92P3-201ENST00000596594 954 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 FRG1HP-204ENST00000617940 757 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC011944.2-201ENST00000624440 683 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 AP000843.1-201ENST00000624880 701 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 MIR3653-201ENST00000625572 110 ntBASIC4.23□□□□□ -1.73
HACD3Q9P035 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HACD3Q9P035 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HACD3Q9P035 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.23□□□□□ -1.73
HACD3Q9P035 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.23□□□□□ -1.73
HACD3Q9P035 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HACD3Q9P035 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HACD3Q9P035 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HACD3Q9P035 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC009951.1-201ENST00000623674 2614 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 MIR383-201ENST00000362257 73 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 RNU6-1279P-201ENST00000383917 103 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 RNU6-98P-201ENST00000384173 107 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HACD3Q9P035 RPL31P52-201ENST00000407532 367 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AL450992.3-201ENST00000413192 568 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.22□□□□□ -1.73
HACD3Q9P035 MTND4P11-201ENST00000417020 1058 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 MTND2P9-201ENST00000422293 931 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC073310.1-201ENST00000423226 1033 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 ARL5AP2-201ENST00000444698 533 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AL096803.2-201ENST00000450032 677 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 MTATP6P14-201ENST00000455189 673 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 RNA5SP246-201ENST00000458909 119 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 UQCRHP4-201ENST00000471686 272 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC041039.1-201ENST00000485656 536 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC091167.1-201ENST00000492017 396 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HACD3Q9P035 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AP002812.4-201ENST00000532139 286 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC092851.1-201ENST00000535964 478 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AL360157.1-201ENST00000565962 87 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC008507.2-201ENST00000588402 1176 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AL161729.3-201ENST00000603533 673 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC097504.2-201ENST00000608088 454 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 MIR7973-1-201ENST00000614683 76 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC139769.3-201ENST00000618383 175 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AC073569.3-201ENST00000619055 682 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AP003476.1-201ENST00000623984 516 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AP005264.7-201ENST00000625003 745 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AL356118.1-201ENST00000635272 1078 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 AC095050.2-201ENST00000510748 1458 ntBASIC4.22□□□□□ -1.73
HACD3Q9P035 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HACD3Q9P035 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HACD3Q9P035 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HACD3Q9P035 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HACD3Q9P035 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HACD3Q9P035 CASC19-261ENST00000641853 1638 ntBASIC4.21□□□□□ -1.73
HACD3Q9P035 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HACD3Q9P035 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
HACD3Q9P035 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.21□□□□□ -1.74
HACD3Q9P035 RNU6-543P-201ENST00000362576 108 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 RNA5SP27-201ENST00000363839 119 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.21□□□□□ -1.74
HACD3Q9P035 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HACD3Q9P035 SNORA56-201ENST00000383966 129 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 RSL24D1P1-201ENST00000404972 493 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 AP000357.1-201ENST00000409926 1165 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 TRGV6-201ENST00000417928 299 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.21□□□□□ -1.74
HACD3Q9P035 AC009965.2-201ENST00000425328 970 ntBASIC4.21□□□□□ -1.74
HACD3Q9P035 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HACD3Q9P035 AC093422.3-201ENST00000428506 305 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms