Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC022616.3-201ENST00000523940 148 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC092375.1-201ENST00000550410 637 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 IMMP1LP2-201ENST00000552954 492 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC092332.1-201ENST00000563684 829 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC017100.2-201ENST00000584628 355 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 MIR212-201ENST00000586026 110 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC016727.2-201ENST00000603988 621 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL022099.1-201ENST00000604551 712 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC121334.2-201ENST00000605387 271 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AP001521.1-201ENST00000609150 300 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC107871.2-201ENST00000612894 502 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL355810.1-201ENST00000614629 552 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 MIR6823-201ENST00000622118 61 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CUEDC1Q9NWM3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-1115P-201ENST00000362490 106 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU1-65P-201ENST00000363919 148 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU4-1-201ENST00000363925 141 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 U3.12-201ENST00000364498 214 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP186-201ENST00000365371 303 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.364-201ENST00000365532 101 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.455-201ENST00000384230 98 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-33P-201ENST00000384793 107 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 MIR541-201ENST00000401360 84 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 HMGB1P17-201ENST00000403495 628 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL049697.2-201ENST00000403708 294 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL096800.1-201ENST00000405326 893 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPL7P10-201ENST00000417407 739 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPL23AP50-201ENST00000434149 455 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPS3AP38-201ENST00000435889 763 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 HMGB1P12-201ENST00000438594 598 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC245291.3-201ENST00000443400 292 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 SLC25A18P1-201ENST00000449385 454 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPL12P25-201ENST00000455592 494 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPL30P15-201ENST00000457129 321 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RN7SL561P-201ENST00000488553 281 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-488P-201ENST00000515918 99 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-1143P-201ENST00000516125 104 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP92-201ENST00000516437 110 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 MIR3154-201ENST00000577829 84 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC069061.3-201ENST00000582254 823 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 NF1P5-201ENST00000588287 448 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 uc_338.11-201ENST00000619132 160 ntBASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms