Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 PTMAP2-201ENST00000397627 327 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 TPT1P2-201ENST00000413105 503 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AL391219.1-201ENST00000422570 483 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 MTND2P11-201ENST00000423638 648 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 ELOCP8-201ENST00000439309 332 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 ELOCP15-201ENST00000442090 332 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 ARL5AP2-201ENST00000444698 533 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 VN1R34P-201ENST00000447387 883 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 RPS20P21-201ENST00000466859 343 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC146507.1-201ENST00000468335 354 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 PTGES3P3-201ENST00000511479 482 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC107016.1-201ENST00000550463 337 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC053481.3-201ENST00000577881 843 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 MIR6864-201ENST00000617935 70 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC006065.5-201ENST00000623427 349 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 MAPK10-253ENST00000641010 4072 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 CASC19-261ENST00000641853 1638 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC016588.2-201ENST00000632484 3021 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RNU6ATAC-201ENST00000408749 126 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RNU4-74P-201ENST00000411280 161 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RANP4-201ENST00000413361 655 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC007389.2-201ENST00000434630 306 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RPL23AP71-201ENST00000470966 469 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 TMED11P-201ENST00000479478 690 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC025459.1-201ENST00000504072 156 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC090071.1-201ENST00000507713 644 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 HMGB1P46-201ENST00000520062 610 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 IGLVIV-53-201ENST00000520107 367 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 COX6B1P6-201ENST00000522347 255 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 UBTFL9-201ENST00000534504 1148 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 MIR432-201ENST00000606207 94 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC090912.3-201ENST00000609775 533 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC233309.1-201ENST00000619522 751 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC022079.2-201ENST00000619739 566 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC019278.1-201ENST00000623516 479 ntBASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF3Q9HD45 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 FAM91A3P-201ENST00000456826 2544 ntBASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 DNAJC19P6-201ENST00000401853 280 ntBASIC4.12□□□□□ -1.75
TM9SF3Q9HD45 JKAMPP1-201ENST00000413804 919 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms