Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 OR5M7P-201ENST00000526140 972 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 ISCA1P3-201ENST00000577104 373 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC005539.1-201ENST00000443768 1479 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AL136131.1-201ENST00000406079 803 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AL035458.1-201ENST00000433096 585 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC079777.1-201ENST00000623836 1953 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 RAC1P2-201ENST00000511164 579 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AC008802.1-201ENST00000519121 791 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AC022080.3-201ENST00000544433 482 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AC015802.5-201ENST00000607478 399 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AL034408.1-201ENST00000637712 664 ntBASIC3.34□□□□□ -1.87
CHD8Q9HCK8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CHD8Q9HCK8 AL513174.1-201ENST00000423182 629 ntBASIC3.34□□□□□ -1.88
CHD8Q9HCK8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.34□□□□□ -1.88
CHD8Q9HCK8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.34□□□□□ -1.88
CHD8Q9HCK8 COX6CP4-201ENST00000605798 228 ntBASIC3.34□□□□□ -1.88
CHD8Q9HCK8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.34□□□□□ -1.88
CHD8Q9HCK8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.34□□□□□ -1.88
CHD8Q9HCK8 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.34□□□□□ -1.88
CHD8Q9HCK8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CHD8Q9HCK8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 MAPK10-372ENST00000641954 3413 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AL391417.1-201ENST00000404100 426 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 LIPT1P1-201ENST00000415870 1186 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 OR2AS1P-201ENST00000427827 319 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 RPS27AP15-201ENST00000447672 466 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 SUMO2P19-201ENST00000518920 295 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AL139174.1-201ENST00000531489 886 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC092376.2-201ENST00000622621 4116 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 OR5AW1P-201ENST00000426334 1006 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC073335.1-201ENST00000427776 363 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 RN7SL371P-201ENST00000578099 267 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.33□□□□□ -1.88
CHD8Q9HCK8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD8Q9HCK8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 HSPA8P19-201ENST00000505359 1517 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms