Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM4Q9C037 MTND6P32-201ENST00000457611 483 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 PLGLA-201ENST00000465668 449 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC098799.1-201ENST00000504752 800 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 RNA5SP519-201ENST00000516480 119 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AL389895.1-201ENST00000554127 252 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 SNORD39.2-201ENST00000579995 76 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 ZNF415P1-201ENST00000582279 1166 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC006254.3-201ENST00000603353 884 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC009093.8-201ENST00000641769 292 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM4Q9C037 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM4Q9C037 SPATA2P1-201ENST00000431223 2055 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 AL021368.2-201ENST00000606125 5352 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC073346.2-201ENST00000624724 2058 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 RNU6-146P-201ENST00000384602 108 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 RPL6P29-201ENST00000414863 865 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 MTND4LP21-201ENST00000415303 295 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC108032.1-201ENST00000416706 207 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 MTND4LP13-201ENST00000425022 298 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 RPL9P32-201ENST00000464118 620 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AP001086.1-201ENST00000494882 321 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 RPL31P61-201ENST00000496160 376 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC119751.5-201ENST00000514077 770 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC006116.5-201ENST00000591936 559 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC004943.3-201ENST00000624116 600 ntBASIC3.95□□□□□ -1.78
TRIM4Q9C037 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM4Q9C037 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM4Q9C037 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC024560.2-201ENST00000507981 1497 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 ZNF826P-207ENST00000622273 1910 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC091286.1-201ENST00000431233 461 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC096638.2-201ENST00000434965 711 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 RAD23BP3-201ENST00000454157 1152 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 RPS20P4-201ENST00000461659 355 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 TRBV8-1-201ENST00000481590 279 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 GMPSP1-201ENST00000514075 579 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 SNORD116-26-201ENST00000516006 96 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 MTND1P6-201ENST00000523621 946 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC063950.1-201ENST00000552036 308 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 MIMT1-201ENST00000597105 1050 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 MRPS35P3-201ENST00000603189 709 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL161729.3-201ENST00000603533 673 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 RNVU1-4-201ENST00000612985 164 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC095038.2-201ENST00000621464 1070 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 MIR6500-201ENST00000622700 86 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC024023.1-201ENST00000624530 922 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 AP001002.2-201ENST00000625137 386 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM4Q9C037 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
TRIM4Q9C037 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
TRIM4Q9C037 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM4Q9C037 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms