Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 CCT8P1-201ENST00000413611 1657 ntBASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 CASC19-221ENST00000641309 1382 ntBASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 MTND5P16-201ENST00000460269 1703 ntBASIC4.89□□□□□ -1.63
SSBP3Q9BWW4 NMD3P1-201ENST00000439704 1488 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MSL3P1-202ENST00000440028 1468 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC024560.2-201ENST00000507981 1497 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 OR11H4-201ENST00000315409 1082 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR375-201ENST00000362103 64 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RN7SKP269-201ENST00000365545 319 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 GNG5P2-201ENST00000372054 207 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SNORD115.1-201ENST00000391109 76 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SNORA17A-201ENST00000391185 133 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC092642.1-201ENST00000392417 425 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TXNP7-201ENST00000406296 293 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR320C1-201ENST00000408566 88 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RNA5SP178-201ENST00000410380 128 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC073264.1-201ENST00000411508 416 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RPS7P15-201ENST00000415804 584 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC015977.1-201ENST00000418887 292 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AL353193.1-201ENST00000421444 268 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AL353678.1-201ENST00000422735 741 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RPL7P57-201ENST00000423238 740 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC108059.2-201ENST00000434626 151 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MTND6P18-201ENST00000439477 513 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC023141.8-201ENST00000442554 208 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MTND6P5-201ENST00000448266 512 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RNU1-88P-201ENST00000459274 128 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 PPIAP19-201ENST00000486414 492 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC008945.1-201ENST00000505144 499 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC110792.2-201ENST00000510278 224 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 IGKV2-19-201ENST00000518132 283 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC027309.2-201ENST00000520566 192 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 HMGN2P36-201ENST00000529541 409 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC093519.1-201ENST00000566109 298 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC005668.1-201ENST00000571142 476 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR3614-201ENST00000581261 86 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AP001180.3-201ENST00000582221 145 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR4260-201ENST00000583107 67 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR3171-201ENST00000584270 74 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 MIR98-201ENST00000606724 119 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC090948.1-201ENST00000607464 549 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 DISC2.1-201ENST00000612827 205 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AL122125.1-201ENST00000616999 600 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SNORA17.5-201ENST00000630429 132 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 AC100810.6-201ENST00000638068 285 ntBASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP3Q9BWW4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms