Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RNY1P12-201ENST00000364251 105 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RN7SKP128-201ENST00000364270 303 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RPL17P50-201ENST00000396131 546 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 BTF3P7-201ENST00000407097 488 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 MIR548F1-201ENST00000408667 84 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RNA5SP178-201ENST00000410380 128 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC078974.1-201ENST00000411597 223 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 SDHDP6-201ENST00000414693 480 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC245052.5-201ENST00000416320 649 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC233728.2-201ENST00000425348 757 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC127526.2-201ENST00000426436 775 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 MRPS10P2-201ENST00000431226 381 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AL139415.2-201ENST00000431968 163 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AL136380.1-201ENST00000447970 162 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AL353691.1-201ENST00000451332 387 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 CEACAMP6-201ENST00000452007 574 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 snoU109.4-201ENST00000458953 143 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC073594.1-201ENST00000462065 364 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC146507.1-201ENST00000468335 354 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 RBM43P1-201ENST00000476891 1081 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 Vault.3-201ENST00000516676 95 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC123904.2-201ENST00000548059 300 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC124947.2-202ENST00000552735 133 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 TPRKBP2-201ENST00000565969 475 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AL356432.3-201ENST00000568952 465 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC011816.2-201ENST00000607089 556 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 AC099669.2-201ENST00000616549 437 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 DDX18P3-201ENST00000404856 2007 ntBASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRAIPQ9BWF2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC005725.1-201ENST00000577346 2607 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 SELENOWP1-201ENST00000322792 252 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RPL23AP32-201ENST00000395315 459 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RPL23AP17-201ENST00000401064 499 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MTND1P23-201ENST00000416931 372 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 TIMM9P3-201ENST00000428659 274 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 UBE2V1P8-201ENST00000437166 265 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MTATP6P30-201ENST00000443540 664 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 HMGN1P36-201ENST00000446623 298 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC018638.3-201ENST00000461273 132 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RN7SL174P-201ENST00000475578 289 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RPS4XP18-201ENST00000495480 763 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL139099.1-201ENST00000497398 403 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL845331.3-202ENST00000562856 261 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC107954.1-201ENST00000565906 727 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL669831.4-202ENST00000590817 238 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC020916.2-201ENST00000591242 360 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 MIR98-201ENST00000606724 119 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 RNA5SP440-201ENST00000612665 119 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AL049794.2-201ENST00000616301 365 ntBASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.54□□□□□ -1.36
TRAIPQ9BWF2 AC116667.2-201ENST00000641075 823 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms