Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AP000676.3-201ENST00000623299 569 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP88Q99567 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NUP88Q99567 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 AL118496.1-201ENST00000440201 1812 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NUP88Q99567 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
NUP88Q99567 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP88Q99567 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NUP88Q99567 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP88Q99567 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
NUP88Q99567 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP88Q99567 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 SNORD116-8-201ENST00000384365 95 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 RAB28P1-201ENST00000411517 641 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AL591848.1-201ENST00000413092 322 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC140479.3-201ENST00000418944 1126 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC011233.1-201ENST00000422812 283 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 RPL34P6-201ENST00000432390 345 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC091390.1-201ENST00000433904 331 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC108463.1-201ENST00000450258 347 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 RPS15AP1-201ENST00000457423 391 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 AC079395.1-201ENST00000510981 262 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 RNU6-488P-201ENST00000515918 99 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 MTCO1P47-201ENST00000523889 1271 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC093591.2-201ENST00000565254 3843 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC110743.1-201ENST00000584870 478 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC133552.5-201ENST00000604266 540 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP88Q99567 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP88Q99567 AP001005.3-201ENST00000622049 129 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AC067852.7-201ENST00000623270 535 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 AL512506.2-201ENST00000624472 458 ntBASIC5.49□□□□□ -1.53
NUP88Q99567 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP88Q99567 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP88Q99567 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP88Q99567 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP88Q99567 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP88Q99567 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP88Q99567 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 AP001642.1-201ENST00000624727 2117 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP88Q99567 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP88Q99567 IL6STP1-201ENST00000346911 1020 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 RNU6-115P-201ENST00000364310 107 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 SNORD116-23-201ENST00000384645 92 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 FABP12P1-201ENST00000401911 322 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUP88Q99567 AL136133.1-201ENST00000413694 376 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 BOLA3P4-201ENST00000418151 400 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 AL590609.2-201ENST00000421430 368 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 RPS27AP7-201ENST00000422792 455 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 RGS17P1-201ENST00000423358 553 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 AL513175.1-201ENST00000431492 780 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
NUP88Q99567 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP88Q99567 NF1P3-201ENST00000457709 450 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP88Q99567 RPS4XP12-201ENST00000461747 709 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 AL591473.1-201ENST00000464297 313 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP88Q99567 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP88Q99567 AC013356.1-201ENST00000489027 564 ntBASIC5.48□□□□□ -1.53
NUP88Q99567 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP88Q99567 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP88Q99567 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
NUP88Q99567 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms