Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORA70.14-201ENST00000516205 110 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 SNORA48.9-201ENST00000516419 162 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 NOP56P3-201ENST00000549457 385 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 GNRHR2P1-201ENST00000555315 631 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AGGF1P8-201ENST00000562979 1000 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC099676.1-201ENST00000608886 657 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AP000255.1-201ENST00000610276 676 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
RPRD1AQ96P16 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPRD1AQ96P16 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 RNF6P1-201ENST00000444889 1784 ntBASIC4.09□□□□□ -1.76
RPRD1AQ96P16 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.76
RPRD1AQ96P16 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 ZNF962P-201ENST00000443465 3140 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 MTCO1P54-201ENST00000430139 712 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 RPS24P8-201ENST00000431490 402 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 RPL34P26-201ENST00000445636 354 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC017007.4-201ENST00000503353 1352 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC139783.2-201ENST00000504847 1145 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 HAUS1P3-201ENST00000523909 662 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC022916.3-201ENST00000592961 742 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC005255.1-201ENST00000593748 216 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC012603.1-201ENST00000606424 528 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RPRD1AQ96P16 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
RPRD1AQ96P16 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 RNU1-87P-201ENST00000363727 170 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 MIR513A2-201ENST00000385249 127 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 RPL17P36-201ENST00000420302 549 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 RPS29P7-201ENST00000439662 171 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 MTND3P4-201ENST00000453537 303 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC092851.1-201ENST00000535964 478 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 OR4U1P-201ENST00000554958 912 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL109741.3-201ENST00000561748 592 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 BNIP3P5-201ENST00000562290 498 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC106785.3-201ENST00000564064 847 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 RN7SL703P-201ENST00000578485 302 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC015911.5-201ENST00000587076 451 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC115085.1-201ENST00000588924 229 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AC067852.4-201ENST00000590314 478 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 HMGB1P50-201ENST00000605814 607 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms