Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC074029.4-201ENST00000624796 1859 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC016588.2-201ENST00000632484 3021 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 IL6STP1-201ENST00000346911 1020 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 RPL22P22-201ENST00000395439 379 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 HMGB1P10-201ENST00000395823 563 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC010385.1-201ENST00000412374 256 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AL024507.1-201ENST00000412741 274 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC008280.1-201ENST00000418851 412 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 Z74021.1-201ENST00000423610 407 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AL138785.1-201ENST00000425821 331 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 RPS27P5-201ENST00000444247 244 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 MTND2P8-201ENST00000450555 1025 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC008379.1-201ENST00000463655 464 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC018635.1-201ENST00000468292 1030 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 GAPDHP36-201ENST00000480688 918 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 RNU5A-7P-201ENST00000515979 116 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC090819.1-201ENST00000523800 1111 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 OR1AB1P-201ENST00000585564 761 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC068620.3-201ENST00000602749 560 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC026741.1-201ENST00000605892 482 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC097504.2-201ENST00000608088 454 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC021851.1-201ENST00000608537 1082 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AP005229.2-201ENST00000609980 697 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC008759.3-201ENST00000613300 508 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 AC007546.2-201ENST00000623996 360 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 MFSD8-213ENST00000641134 1327 ntBASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NECTIN4Q96NY8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 RNU6-1005P-201ENST00000384519 107 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 RNU6-925P-201ENST00000384629 104 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 RPS24P12-201ENST00000402084 394 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 TPT1P2-201ENST00000413105 503 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC092685.1-201ENST00000447960 1243 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC023050.1-201ENST00000498198 304 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 OR5H3P-201ENST00000502817 919 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 DSTNP2-201ENST00000504533 515 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 TCP11X3P-202ENST00000514289 1254 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 TRMT10BP1-201ENST00000519377 943 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AP003066.2-201ENST00000529375 555 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 POLR2KP1-201ENST00000553226 168 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC120057.2-201ENST00000571520 271 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC245884.10-201ENST00000597355 337 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC084757.4-201ENST00000616350 526 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AC007275.1-201ENST00000621243 671 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NECTIN4Q96NY8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 AC068254.2-201ENST00000623938 3577 ntBASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 RNA5SP119-201ENST00000362715 117 ntBASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 RNU1-83P-201ENST00000363426 164 ntBASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 RNU6-354P-201ENST00000383862 107 ntBASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 RNU6-610P-201ENST00000384264 107 ntBASIC4.37□□□□□ -1.71
NECTIN4Q96NY8 HMGB1P13-201ENST00000406019 642 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms