Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL23AP35-201ENST00000451906 501 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 SSXP1-201ENST00000453640 473 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 RNU6-599P-201ENST00000459383 107 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC126182.1-201ENST00000478134 357 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 MTAPP1-201ENST00000489154 819 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC048346.1-201ENST00000510247 144 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC109471.1-201ENST00000511631 612 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 IGHV3-32-201ENST00000519182 355 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC012339.2-201ENST00000523996 453 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 OR8A2P-201ENST00000528631 952 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 OR11J2P-201ENST00000555298 907 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 PSMB7P1-201ENST00000556349 514 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC010487.1-201ENST00000594408 1172 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AL020997.2-201ENST00000602607 184 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 MIR7973-1-201ENST00000614683 76 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 U6.42-201ENST00000618440 107 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 RNU6-368P-201ENST00000620928 107 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 MIR8080-201ENST00000622224 89 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 RNU6-538P-201ENST00000622329 107 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC095031.1-201ENST00000623685 672 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC244258.1-201ENST00000637553 1071 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 MKKS-204ENST00000639674 192 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AC099654.12-201ENST00000639868 649 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 RNF6P1-201ENST00000444889 1784 ntBASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.85□□□□□ -1.47
CHAMP1Q96JM3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 RNU6-867P-201ENST00000364956 107 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 RPL26P29-201ENST00000415623 438 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 ATG4AP1-201ENST00000416893 538 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 UBE2V1P3-201ENST00000439651 417 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 RNU7-27P-201ENST00000459281 62 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC079841.1-201ENST00000481228 950 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 RPS4XP1-201ENST00000482189 787 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 RPS27P23-201ENST00000487608 251 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 OR5D2P-201ENST00000524390 911 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AP003392.2-201ENST00000527269 208 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC004217.3-201ENST00000551552 878 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC087883.1-201ENST00000551882 391 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 OR4G1P-201ENST00000588632 938 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC012065.4-201ENST00000602445 679 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC055764.2-201ENST00000610089 670 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC005332.6-201ENST00000613178 446 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 AC026368.1-201ENST00000614934 690 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 LINC01739-205ENST00000641890 573 ntBASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHAMP1Q96JM3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHAMP1Q96JM3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHAMP1Q96JM3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHAMP1Q96JM3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHAMP1Q96JM3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.84□□□□□ -1.48
CHAMP1Q96JM3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SUGT1P1-201ENST00000379514 476 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC104297.1-201ENST00000393779 870 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 RPL23AP47-201ENST00000408017 460 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 MIR1182-201ENST00000408363 97 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 RPL34P6-201ENST00000432390 345 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms