Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS50Q96JG6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS50Q96JG6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 RNU6-582P-201ENST00000362989 107 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 RNU5D-1-201ENST00000363299 116 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 RNU5A-2P-201ENST00000384337 116 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 MIR92A2-201ENST00000385299 75 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 ZNF885P-201ENST00000420174 1098 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AL589823.1-201ENST00000429577 183 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 RBMY2QP-201ENST00000429799 1147 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 PPIAP13-201ENST00000434706 478 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 MTCO2P25-201ENST00000447065 681 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC097262.1-201ENST00000452559 548 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 IFNWP4-201ENST00000453148 294 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AL356981.1-201ENST00000454879 684 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC091180.1-201ENST00000462104 372 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 MTND6P6-201ENST00000478031 263 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC147055.4-201ENST00000504399 745 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 MIR3915-201ENST00000578518 97 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AP005119.2-201ENST00000579735 1105 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 MIR3934-201ENST00000579806 107 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 NBR2-204ENST00000587322 63 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC104785.1-201ENST00000603220 588 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC073530.2-201ENST00000623987 261 ntBASIC4.84□□□□□ -1.63
VPS50Q96JG6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.84□□□□□ -1.63
VPS50Q96JG6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS50Q96JG6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS50Q96JG6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.64
VPS50Q96JG6 AL672167.1-205ENST00000641112 3080 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC096656.1-201ENST00000623826 1364 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 SNORA66-201ENST00000384792 133 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 BTF3L4P1-201ENST00000413813 468 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC004865.1-201ENST00000442276 1003 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 PNPLA4P1-201ENST00000458328 305 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC092754.2-201ENST00000463506 460 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 NCOR1P1-202ENST00000486162 291 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 HMGN2P25-201ENST00000486956 268 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 STMN1P2-201ENST00000508435 439 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 COX6B1P5-201ENST00000509843 249 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 MTND1P22-201ENST00000510572 951 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC010285.3-201ENST00000511668 676 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 RNA5SP249-201ENST00000516127 99 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 RNA5SP135-201ENST00000517019 125 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 CDH12P4-201ENST00000517835 295 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 CDH12P3-201ENST00000517935 295 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 CDH12P1-201ENST00000518435 295 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 OR5AZ1P-201ENST00000527448 943 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms