Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RN7SKP44-201ENST00000363602 316 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RNU6-298P-201ENST00000390888 96 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 MIR1250-201ENST00000408098 113 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RN7SKP229-201ENST00000410465 302 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RN7SKP100-201ENST00000411258 284 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RPL23AP27-201ENST00000415161 451 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 COX6B1P1-201ENST00000415962 213 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 TCEA1P2-201ENST00000420496 906 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 BX510359.3-201ENST00000422168 306 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RPEP2-201ENST00000432149 701 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 CKS1BP5-201ENST00000434172 273 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 VN1R32P-201ENST00000452234 905 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC079804.1-201ENST00000461922 436 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RPL7AP6-201ENST00000477943 801 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 MTND4LP2-201ENST00000502312 285 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC109471.1-201ENST00000511631 612 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 MTCO3P15-201ENST00000526563 574 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC118942.1-201ENST00000529674 1035 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 OR6C73P-201ENST00000546432 358 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 HMGN2P6-201ENST00000551091 273 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC044913.1-201ENST00000557200 430 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 CYP4A43P-201ENST00000568156 121 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 Z82195.1-201ENST00000604558 398 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC097504.2-201ENST00000608088 454 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC099676.1-201ENST00000608886 657 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC068722.2-201ENST00000618734 544 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 MIR6853-201ENST00000619642 74 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC007546.2-201ENST00000623996 360 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AC013437.2-201ENST00000639587 677 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 CPHL1P-201ENST00000461341 3407 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 ZNF137P-201ENST00000456718 1920 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 AL355578.1-201ENST00000607405 1328 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 BRAFP1-201ENST00000445336 2703 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL590240.1-201ENST00000334118 313 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 RNA5SP307-201ENST00000362863 116 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 RNU6-1226P-201ENST00000384317 107 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 SNORD116-23-201ENST00000384645 92 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MIR649-201ENST00000384843 97 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MTCO1P56-201ENST00000401674 224 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL355379.1-201ENST00000405542 640 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 SNORA11.3-201ENST00000408471 128 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MTCYBP42-201ENST00000444653 1130 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC012671.1-201ENST00000451912 203 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MRPL42P4-201ENST00000453267 443 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 HPRT1P1-201ENST00000509498 657 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MIR3667-201ENST00000581025 74 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms