Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SNORA70J-201ENST00000384182 135 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 RIMKLBP2-201ENST00000424737 654 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC133104.1-201ENST00000429100 218 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC006946.1-201ENST00000429106 328 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 snoU13.22-201ENST00000459428 104 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 RPS21P4-201ENST00000487122 248 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC021146.2-201ENST00000504736 556 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 RNU6-1046P-201ENST00000516538 107 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 RNA5SP135-201ENST00000517019 125 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 DEFB131D-201ENST00000526803 184 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 NMNAT1P1-201ENST00000554095 876 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 AL049634.1-201ENST00000453770 1720 ntBASIC9.93□□□□□ -0.82
TRIM41Q8WV44 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TRIM41Q8WV44 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 NMD3P1-201ENST00000439704 1488 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC130304.1-201ENST00000622942 2385 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 GNG5P1-201ENST00000255500 204 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 Y_RNA.202-201ENST00000364083 110 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RNU6-619P-201ENST00000365146 108 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RN7SKP140-201ENST00000411196 284 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RPL31P44-201ENST00000447680 377 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC132479.1-201ENST00000449160 144 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC112204.1-201ENST00000502591 103 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RN7SKP288-201ENST00000516227 268 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 RNU6-1261P-201ENST00000517194 104 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AP002812.4-201ENST00000532139 286 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC068587.4-201ENST00000533893 186 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 MIR4307-201ENST00000582802 84 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 HMGN1P30-201ENST00000589286 268 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC087783.2-201ENST00000605070 562 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AC097468.3-201ENST00000607956 456 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 AL139099.4-201ENST00000614802 114 ntBASIC9.92□□□□□ -0.82
TRIM41Q8WV44 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM41Q8WV44 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC005725.1-201ENST00000577346 2607 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 Y_RNA.25-201ENST00000362528 102 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 RNU6-98P-201ENST00000384173 107 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 MIR1303-201ENST00000408625 86 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 RPL26P28-201ENST00000451325 435 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 IGLV2-34-201ENST00000490007 283 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC023194.1-201ENST00000493084 308 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AL049779.2-201ENST00000553847 315 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 SUB1P2-201ENST00000556401 297 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC113139.1-201ENST00000605049 239 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 MIR98-201ENST00000606724 119 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 C2orf27A-204ENST00000623058 969 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 FTO-223ENST00000640179 210 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC091046.3-201ENST00000631455 1574 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC005225.5-201ENST00000623547 2225 ntBASIC9.91□□□□□ -0.82
TRIM41Q8WV44 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM41Q8WV44 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms