Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM3Q8TF72 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AL031121.1-201ENST00000406553 254 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC009263.1-201ENST00000441193 1239 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC005229.2-201ENST00000456995 399 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 NPM1P17-201ENST00000479221 602 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 RPL21P13-201ENST00000488305 481 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 HMGN1P11-201ENST00000508668 303 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AL353684.1-201ENST00000622677 1120 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 TRGV5P-201ENST00000419915 354 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 HIGD1AP12-201ENST00000427832 281 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC005300.1-201ENST00000428401 373 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 HMGB3P9-201ENST00000441799 583 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 MRPL35P4-201ENST00000453682 566 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC020914.4-201ENST00000597690 277 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 Z82195.1-201ENST00000604558 398 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 AC026368.1-201ENST00000614934 690 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SHROOM3Q8TF72 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 RNU1-89P-201ENST00000384592 164 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC096644.3-201ENST00000416788 338 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 MTND2P15-201ENST00000418575 892 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AL591503.2-201ENST00000442314 1005 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 RPL21P23-201ENST00000446654 460 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC084357.1-201ENST00000473404 255 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 HMGB3P13-201ENST00000511263 607 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC010342.1-201ENST00000514047 877 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC093853.1-201ENST00000515689 483 ntBASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM3Q8TF72 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 SNORD3H-201ENST00000384486 214 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 MTHFD2P2-201ENST00000407725 247 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 RN7SKP284-201ENST00000411002 343 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 RPS20P1-201ENST00000434853 354 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC008489.1-201ENST00000524271 483 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms