Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.74□□□□□ -1.81
CLHC1Q8NHS4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CLHC1Q8NHS4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.74□□□□□ -1.81
CLHC1Q8NHS4 AC006042.3-201ENST00000454684 1469 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MIR423-201ENST00000362201 94 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 RHEBP3-201ENST00000411920 351 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 OR8G2P-201ENST00000412796 908 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AL691449.1-201ENST00000426570 421 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 USP12PY-201ENST00000427677 1064 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 USP9YP31-201ENST00000431405 881 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AL136097.1-201ENST00000456945 913 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC146507.1-201ENST00000468335 354 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AL049830.2-201ENST00000480072 201 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 CEACAMP10-202ENST00000495431 496 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MRPL49P2-201ENST00000521066 465 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 C1GALT1P3-201ENST00000522049 819 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MTND4LP24-201ENST00000572277 291 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 PCNAP1-202ENST00000595299 752 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AF230666.2-201ENST00000602328 725 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AL445423.1-201ENST00000609941 536 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MLECP1-201ENST00000615893 709 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC022079.2-201ENST00000619739 566 ntBASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLHC1Q8NHS4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 ENSAP1-201ENST00000392855 326 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL807761.1-201ENST00000417622 171 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 RNU6-1004P-201ENST00000516584 111 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AC067904.2-201ENST00000517322 1283 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AC087369.1-201ENST00000520775 996 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AC091516.1-201ENST00000549191 703 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 CENPUP2-201ENST00000555897 1186 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 MIR548Y-201ENST00000582739 110 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL034351.1-201ENST00000605288 668 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL137246.1-201ENST00000607072 977 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 AL139089.1-201ENST00000620372 975 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 MTND5P3-201ENST00000438536 1800 ntBASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
CLHC1Q8NHS4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLHC1Q8NHS4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms